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berkeley_reactor_200306_biofilm_scaffold_42397_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(4421..5638)

Top 3 Functional Annotations

Value Algorithm Source
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 406.0
  • Bit_score: 558
  • Evalue 6.90e-156
Phosphopentomutase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2T1_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 406.0
  • Bit_score: 558
  • Evalue 4.90e-156
deoB; phosphopentomutase similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 406.0
  • Bit_score: 558
  • Evalue 1.40e-156

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGACGCGCGCCTTCGTCCTGGTGTTGGATTCCGTCGGCATCGGCGCCGCCGCCGATGCCGACGCCTATGGCGATGCCGGCGCCGACACGCTCGGCCATATCGCGGAGGCCTGCGCCGCCGGCCGGGCCGACCGGGCGGGCCTGCGCGCCGGGCCGCTCGCCCTGCCCCATCTCGTCGCCCTCGGCCTCGGCCGGGCGGCCGAGGCCTCGACCGGGCGGCTGCCGCCGGGGCTCGCCGGCGCCGCCGGGCCGGGCCGCTGGGGCTATGCCGTCGAGCGCTCCAAGGGCAAGGACACGCCGTCCGGCCATTGGGAGATCGCCGGCTTCCCCGTGCCGTTCGACTGGGGCTATTTCCCCAGCACCGTCCCCTGCTTTCCCCCGAGCCTGATCGCCGCCGTCGCCGCCGAGGCCGGACTGCCCGGGGTGCTCGGCCAGAAGCATGCCTCGGGCACCGAGATCATCGCCGAGCTCGGGGCCGAGAGCATCGCCACCGGCAAGCCGATCTTCTACACCTCAACCGACAGCGTGCTGCAGATCGCCGCGCACGAGGAGGCCTTCGGGCTCGATCGGCTGCTGGCCCTCTGCGTCATCGTCCGCCGCCATGTCGATGCCCTCGATATCGGCCGGGTGATCGCCCGTCCCTTCCTCGGCGACGCGGCGTCCGGCTTCGAGCGCACCGCCAACCGGCGCGACTATGCCGTGCCGCCGCCGGCCGACACCATCCTCGACATCCTGGCGCGGGAAGGGCGGCCGGTGATCACCGTCGGCAAGATCGGCGACATCTTCGCCCATCGCGGCACCGGCGAGATCCTGAAGGGCGCCGGCAACATGGCGCTGGTCGACAAGACCCTCGCCGCCATGGACCGGCTGCCGGAGGGCGGCTTCCTCTTCGCCAACTATGTCGACTTCGACATGCTCTACGGCCATCGCCGCGACGTGCCGGGCTATGCGGCGGCGCTGGAGGCCTTCGACCGGCGCCTGCCCGAGCTCACCGGCCGGCTGCGGCCGGGCGACCTCCTGGTGATCACCGCCGACCATGGCTGCGACCCGACCTGGACGGGGACGGACCATACACGCGAGCACGTTCCGGTGCTGGTGGCCGGGCCCGGGATCGCGCCGGGGCCGATCGGCCGGCGCGACGGCTTCGCCGACATCGCCGCGACGGTGGCGGCGCATCTGCGCATCCCCCCGCCCGCGGCGGGTCGGGCCTTCCTCTGA
PROTEIN sequence
Length: 406
MTRAFVLVLDSVGIGAAADADAYGDAGADTLGHIAEACAAGRADRAGLRAGPLALPHLVALGLGRAAEASTGRLPPGLAGAAGPGRWGYAVERSKGKDTPSGHWEIAGFPVPFDWGYFPSTVPCFPPSLIAAVAAEAGLPGVLGQKHASGTEIIAELGAESIATGKPIFYTSTDSVLQIAAHEEAFGLDRLLALCVIVRRHVDALDIGRVIARPFLGDAASGFERTANRRDYAVPPPADTILDILAREGRPVITVGKIGDIFAHRGTGEILKGAGNMALVDKTLAAMDRLPEGGFLFANYVDFDMLYGHRRDVPGYAAALEAFDRRLPELTGRLRPGDLLVITADHGCDPTWTGTDHTREHVPVLVAGPGIAPGPIGRRDGFADIAATVAAHLRIPPPAAGRAFL*