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berkeley_reactor_200306_biofilm_scaffold_42397_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(5647..6363)

Top 3 Functional Annotations

Value Algorithm Source
Thymidine phosphorylase {ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|SAAS:SAAS00031985};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 240.0
  • Bit_score: 286
  • Evalue 2.30e-74
thymidine phosphorylase (EC:2.4.2.4) similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 236.0
  • Bit_score: 255
  • Evalue 1.10e-65
Thymidine phosphorylase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPB4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 240.0
  • Bit_score: 270
  • Evalue 1.20e-69

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGGACGTCAAGACCGGCTCCGGCGCCTTCATGCCGACGCTGGAGGGCTCGCGCGAGCTCGCCGCCTCGATCGCCGGCGTCGCCACCGGCGCCGGCCTGCCCACGACGGCGCTGATCACCGCCATGGACCAGCCGTTGGCCAGCGCCGCCGGCAATGCGGTGGAGGTGCGCAACGCCATCGATTTCCTGACCGGTGCCCGGCGCGACCCGCGCCTCCTCGAGGTGACGCTGGCGCTCGGCGCCGAGATGCTGGTGCTCGGCAAGCTGGCGAGAACCCCGGAGGACGGCCGCACGGCGATGCTGGGCGCCTACGAGTCCGGGGCGGCCGCCGAGCGCTTCGCCCGCATGGTCGCGGCGCTGGGCGGCCCGGCCGACCTCCTCGATCGCCCCGACAGCCATCTCCAGGCCGCACCGGTGGTGCGGCCGGTGCCGGCGCCGGCAGGCGGCCGCATCGGCGCCATCGACACGCGGGCCGTCGGCCTCGCCGTCGTCGCCCTCGGCGGCGGCCGCACCCGGCCGCAAGACCCGGTCGATCACGCCGTCGGCTTCACCGAGCTCGCGGCCCTGGGCGACACCGTCGATGCGCAGCGCCCGCTCGCCCTCGTCCATGCCCGCAGCGAAGCTGCCGCCGATGCGGCGACCGCCGCCCTGCAGGCCGCCTGCAGCATCGGCGAGGCGGAGGCGCTGCCGCCCGTCCTGCAGCGCATCGAAGCGTGA
PROTEIN sequence
Length: 239
MDVKTGSGAFMPTLEGSRELAASIAGVATGAGLPTTALITAMDQPLASAAGNAVEVRNAIDFLTGARRDPRLLEVTLALGAEMLVLGKLARTPEDGRTAMLGAYESGAAAERFARMVAALGGPADLLDRPDSHLQAAPVVRPVPAPAGGRIGAIDTRAVGLAVVALGGGRTRPQDPVDHAVGFTELAALGDTVDAQRPLALVHARSEAAADAATAALQAACSIGEAEALPPVLQRIEA*