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berkeley_reactor_200306_biofilm_scaffold_42397_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(13048..14766)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF4FB8 related cluster n=1 Tax=unknown RepID=UPI0003CF4FB8 similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 567.0
  • Bit_score: 1015
  • Evalue 1.60e-293
amino acid/polyamine/organocation transporter similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 567.0
  • Bit_score: 1015
  • Evalue 5.80e-294
Amino acid permease {ECO:0000313|EMBL:ESY69963.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 567.0
  • Bit_score: 1015
  • Evalue 2.20e-293

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Taxonomy

Mesorhizobium sp. LNHC232B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1719
ATGACGGTCACCACCATCACCGCCGAGCCGGCGGACCGCCAGCTTCTGCGCCATATCGACTGGCGCGGCGCCTTCTGGGTCGCCAGCGGCGTGCCCGCCCTGGTCCTGTTCTCGATCGGCGGCATCGCCAGCACGACCGGGACGCTCGCCTTCCTGATCTGGACCGTGTCCATGATCATGGGCTTCATCCAGTCCTTCACCTATGCCGAGATCGCCGGCCTGTTCCCGAACAAGTCGGGCGGCGCCTCCGTCTACGGCGCCACCGCCTGGCTGCGCTATTCCAAGTTCATCGCGCCGCTGTCGGTCTGGTGCAACTGGTTCGCCTGGTCGCCGGTGCTGTCGCTCGGCTGCTCCATCGCCGCCGCCTACATGCTGAACGCGGTGGCGCCGATCCCGAGCTTCACCGAGACCTCGCCGGAGGTCGTGGCCTATATCGCCGCCCATGCCGGCACCAGCGCGGCCGACGCGATCGCGGCGGTCACCGCCGCGGCGACCCCGGCCCTGCGCAGCTGGACGCTGTTCAGCCATTCGCTCGGCCCGGTCGGCTTCTCCTTCAACGCCGTCTTCTTCATCGGCGCCGTGCTGATGCTGATCACCTTCGCCATCCAGCATCGCGGCATCCTCGGCACCGCCAACGTCCAGAAATATATCGGCCTGCTCGTCATCATCCCGATGCTGATCGTCGGCGTGGTGCCGATCCTCACCGGGCAGATCCACTGGGCCAACTATTCGCCGCTGGTGCCGCTCGCCGCCGCCGGCGCTCCGGCGCCGGGCAGCTGGAACATCGCCGGCTGGACGCTGGTGCTCGGCGGCATGTTCATCGCCGCCTGGTCGACCTACGGCTTCGAGACCGCGGTCTGCTACACCTCCGAGTTCAAGGATCCCGGCACCGACACCTTCAAGGCGATCTTCTATTCCGGCCTGCTCTGCCTGCTGCTGTACATCCTCGTGCCCTTCACCTTCCAGGGCGTGCTCGGCCTCACCGGCATGCTCGAGCCCTCGATCGGCGACGGCTCCGGCGTCGCCGACGCCATGGGCAAGATGGTCGGCGGCTCCGGCTTCATCACCAACATCATGGTGATGCTGATGATCCTGGCCCTGATCCTGTCGATCATGACGGCCATGGCCGGCTCCTCGCGCACGCTCTACCAGGGCTCGGTCGACGGCTGGCTGCCGAAATATCTCAGCCACGTCAATTCGCACGGGGCGCCGACCCGGGCGATGTGGACCGACCTCGTCTGCAACCTCATCGTCCTGGCCATCGCCAGCACGGATGCGACCAGCTTCTTCTTCATCCTGGCCGTGTCGAACTGCGGCTACATCATCTTCAACTTCCTCAACCTCAATGCCGGCTGGATCCACCGCATCGACAACGGCCATATCGCGCGGCCGTGGAAGGCGCCGACCTGGATCCTCGGCATCGGCGCGATCTTCGCCTATGTCAACGCGGTCTTCATGGGCGCCGGCGCCAAGACCTGGAACCCGATCGCCCTGTGGGCCGGGCTGATCTTCGCGGCCCTGATCATCCCGGTGTTCTGCTTCCGGCACTATGTCCAGGACGGCGGCAAGTTCCCCGAGCACATGCTCGACGACCTCGGCATGAAGCCGTCCGACCTGCAGGTGCGGAAGGCGGGCATCCTGCCCTACCTGACGCTGGTGGCAGGCCTGGCGGTGGTGCTGATCGCCAACTGGTTCTTCGTGCTGCCTCCCGCACCGTGA
PROTEIN sequence
Length: 573
MTVTTITAEPADRQLLRHIDWRGAFWVASGVPALVLFSIGGIASTTGTLAFLIWTVSMIMGFIQSFTYAEIAGLFPNKSGGASVYGATAWLRYSKFIAPLSVWCNWFAWSPVLSLGCSIAAAYMLNAVAPIPSFTETSPEVVAYIAAHAGTSAADAIAAVTAAATPALRSWTLFSHSLGPVGFSFNAVFFIGAVLMLITFAIQHRGILGTANVQKYIGLLVIIPMLIVGVVPILTGQIHWANYSPLVPLAAAGAPAPGSWNIAGWTLVLGGMFIAAWSTYGFETAVCYTSEFKDPGTDTFKAIFYSGLLCLLLYILVPFTFQGVLGLTGMLEPSIGDGSGVADAMGKMVGGSGFITNIMVMLMILALILSIMTAMAGSSRTLYQGSVDGWLPKYLSHVNSHGAPTRAMWTDLVCNLIVLAIASTDATSFFFILAVSNCGYIIFNFLNLNAGWIHRIDNGHIARPWKAPTWILGIGAIFAYVNAVFMGAGAKTWNPIALWAGLIFAALIIPVFCFRHYVQDGGKFPEHMLDDLGMKPSDLQVRKAGILPYLTLVAGLAVVLIANWFFVLPPAP*