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berkeley_reactor_200306_biofilm_scaffold_42397_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 15241..16650

Top 3 Functional Annotations

Value Algorithm Source
Acyl-CoA dehydrogenase, short-chain specific n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P723_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 470.0
  • Bit_score: 768
  • Evalue 2.80e-219
Acyl-CoA dehydrogenase, short-chain specific {ECO:0000313|EMBL:EPX60255.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 470.0
  • Bit_score: 768
  • Evalue 3.90e-219
acyl-CoA dehydrogenase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 467.0
  • Bit_score: 735
  • Evalue 7.30e-210

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Taxonomy

Cystobacter fuscus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGTCGGCAACGAAACTATGGGGCGGCGAATCGTTCTCGGGCCTCGGCTACGAGTGGGATCCGCAATGGGTCCTGACCGAGCGCCAGAAGGCGCTGCAGGCCAAGCTGATCGAGCTGTGCCAGAGCGACCTGCGCGTCAACGCCATCGAGAGCGACAAGAACCGCGTCTATCCCCGCAAGAACTTCCAGGTGCTGGCCAAGCACGGCTTCCTCGGCCTGATCGTGCCGAAGGAGCTCGGCGGCATGGGCGAGAACCACACCGCCGCCGCCATGGTGGTGGAGACCATCGCCCGCTATGGCTGCGCCTCCACGGCCATGTGCTACACCATGCACACCGGCGCCGTGGCGGCAGCGCTGCTGCGCCACCACGACAACGAGGCCCTGAAGGACATCCTGCGCCGGATCGACAAGGACTGCCTGATCGGCACCCTGTCCTATTCCGACCCGGAGACGGGCTCGCATTTCTGGTACCCGATCTCCTCGGGCGCGGAGGAGACCAAGGACGGCTGGCACGTCAAGAAGAAGGCGTCCTGGACCACGTCGGGGGGCTTTGCCGACTGGTACATCGTGCAGACGACGAGCCCGAACTTCAACGGCAACTATGCCGACCTCTCCTGCTTCCTGATCCTCGGCGATGAAGCCAGCTACGACCCGGCCAACTGGAACGGCCTCGGCCTGCGCGGCAACCAGTCGGGGCCGTTGGAGATCGACCGGGTGGTGCCGCGCGAGCGCCTGGTCGGCCCGGTGGGCGACGGCGCCCGCTCCAACGACGAGGTGGTCGACCCCTTCTTCCTGCTCTGCTCCTCGGCCTGCTGGAGCGGCATCGCGCTCGGCATGATCGACATCGCCAAGGCGCACACCACCAAGAAGACCCACAAGGACGTCGGCATGCGCGTCGCCGACTATCCCACCATCCAGGACTATGTCGGCGAGGCGATCATCGACACCAACGTGGTGCGCTCGATGGACTTCATGATCGCCAAGGCCCTCGACGACGCCACCAAAGGCTGCGACTGGTCGCTGCACAAGGACGACGTCACCGTGCTGCCGCGCTCGGCGCTGCTGCACTGGCTCTGGCAGCTCAAGTTCGCCGCCGCCAAGAACGTCGCCCATGTCTCGGACAAGATGCTGCACGCCTGCGGCGGCACCGGCTACAAGCCGGAGCTGCAGATCGAGCGCTATCTGCGCGACGGCAAGGCCGGCTGGGTGATGGGCCCGACCAACGAGGTGCTGCGCCAGTTCGTCGGCAAGGCCTCGCTGCTCGGCTTCGAATCGCTCGACTACTGGAACACCTCGATCAACGAGCGCGTCATCAACAACGAGATCAAGAAGATGGACGCCGACGCCAAGCGGGCCCTGGCCGAGCGCCTGCTGGCCGAAACCGCGGCGCCGGCCCGACGGATCGCTTGA
PROTEIN sequence
Length: 470
MSATKLWGGESFSGLGYEWDPQWVLTERQKALQAKLIELCQSDLRVNAIESDKNRVYPRKNFQVLAKHGFLGLIVPKELGGMGENHTAAAMVVETIARYGCASTAMCYTMHTGAVAAALLRHHDNEALKDILRRIDKDCLIGTLSYSDPETGSHFWYPISSGAEETKDGWHVKKKASWTTSGGFADWYIVQTTSPNFNGNYADLSCFLILGDEASYDPANWNGLGLRGNQSGPLEIDRVVPRERLVGPVGDGARSNDEVVDPFFLLCSSACWSGIALGMIDIAKAHTTKKTHKDVGMRVADYPTIQDYVGEAIIDTNVVRSMDFMIAKALDDATKGCDWSLHKDDVTVLPRSALLHWLWQLKFAAAKNVAHVSDKMLHACGGTGYKPELQIERYLRDGKAGWVMGPTNEVLRQFVGKASLLGFESLDYWNTSINERVINNEIKKMDADAKRALAERLLAETAAPARRIA*