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berkeley_reactor_200306_biofilm_scaffold_53974_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(12247..12975)

Top 3 Functional Annotations

Value Algorithm Source
Putative Phage shock protein A (PspA) n=1 Tax=mine drainage metagenome RepID=E6PRX3_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 231.0
  • Bit_score: 270
  • Evalue 1.20e-69
Putative Phage shock protein A (PspA) {ECO:0000313|EMBL:CBH97679.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 231.0
  • Bit_score: 270
  • Evalue 1.70e-69
phage shock protein A, PspA similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 232.0
  • Bit_score: 266
  • Evalue 5.00e-69

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 729
ATGAGCATCCTTGAACGCATCGCCGACCTGTTCCAGGCCAAGACCCACAAGCTCCTGTCGCGACTCGAGGATCCCAACGAGACGCTGGACCTGTCCTACGAGCGGATGCTCACGGGGCTGCAGGAGACCAGGCGCCACCTCGCCGACGTGGTGACGGAGCGCACCTCGCTGGAGCGCCAGATCGCCGCCGGCCGGGCCGAGGCCGAGCGGGCCGAGAACGATGCGCGCCTGGCCATCCGCTCCGACCGCGAGGACCTCGCCCGCGCCGCCCTGGCGCACAAGCAGGCGGCCCTGGCCAAGCTCGACACGCTGGCCCAGGCCCGCAACGCCATCGCGGCGCAGGCCGACAAGCTCATCGAGTACCAGTCCAAGCTCGAAGCCAGGATCGAGCAGTTCCGCAACCAGAAAGAGGTGATGAAGAGCACCTATGCCGCGGCGCAGGCCCAGGTGCGGGTGACCGAATCGCTGACGGGCATCGGCTCCGACCTCGGCAATGTCGGCGGCGCCCTGCAGCGGGCCCAGGACAAGGTCGAGGGCATGCAGGCCCGGGCCGGGGCGATGGAGGGCATGCTCGAGGCCGGGATCCTGACCGACCCGCTCGACCCCAGGAGCGCCACCGACCACGAGCTCGACAAGCTGCGCGCAACCGGCGCCATCGACGCCGACATGGCGCGCCTGAAGGCCGAGCTCGGCGGCGAGACCGGGGGCAAGGCGCTGCCGGCGCCCTGA
PROTEIN sequence
Length: 243
MSILERIADLFQAKTHKLLSRLEDPNETLDLSYERMLTGLQETRRHLADVVTERTSLERQIAAGRAEAERAENDARLAIRSDREDLARAALAHKQAALAKLDTLAQARNAIAAQADKLIEYQSKLEARIEQFRNQKEVMKSTYAAAQAQVRVTESLTGIGSDLGNVGGALQRAQDKVEGMQARAGAMEGMLEAGILTDPLDPRSATDHELDKLRATGAIDADMARLKAELGGETGGKALPAP*