ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_57697_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(385..1353)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, periplasmic solute-binding protein n=2 Tax=Rhizobium meliloti RepID=F7XJV4_SINMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 322.0
  • Bit_score: 526
  • Evalue 1.30e-146
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 322.0
  • Bit_score: 526
  • Evalue 3.60e-147
ABC transporter, periplasmic solute-binding protein {ECO:0000313|EMBL:AEH83282.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 322.0
  • Bit_score: 526
  • Evalue 1.80e-146

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGACAAAAGCCCTTCCGGCGTGCGCGCTGGCGGCAGCCCTGATGGCCGGCACCTTCGGCATGGCCGCGGCGGCCGACTGCAAGGTCGGCGTCGCCATGTACACGCTGAGCGCGCCCTATTTCGCGGCCCAGGAAGCCGCGGCCGCGGACCAGGCCAAGAAGGCCGGCTGCGAGGTGTCGACGGCCGACGGCCAGAACGACATGGGCAAGCAGATCTCCGACGTCGAGGACATGGTCGCCAAGGGCGTCAACCTGCTGATCCTCAATCCGCGCGACCCCGAAGGCCTGGTCGCCGCCGCCAATGCCGCCACCGCGGCCGGCGTCAAGGTCGTGGTGATGGATTCCAGCATCAACACCAAGGCGAACGTCATCACCCAGGTGCGCTCGTCCAACGACCAGAACGGCTTCCTCGTCGGCCAGTGGCTGGCCAAGAAGATGCAGGGCAAGCCGGCCAAGATCCTCCTGCTCTCCGGATCGCAGGGCAACGAGGTCGGCCGCGACCGGCGCCTCGGCGTGTTCCGCGGCCTGATCGAGGGCCAGCTGGTCAACGAGGGCAAGGGCGGCTTCGAGGTGCTCGGCCAGGGCTGGGGCGGCTGGTCGAACGAAGGCGGCCTGAAGGCGGCCGAGGACCTGCTCCAGGCCCATCCCGACGCCAATGTCGTGCTCGGCGAGAACGATTCGATGGTGCTCGGCGCCATCAAGGCGCTGCAGGCCGCCGGCAAGAGCGACGTGCTCGTCCTTGCCGCCGCCGACGGCCAGAAGGAGGCCCTCGCCCTGATCAAGGAGGGCAAGTACGGCGCCACCGGCCTCAACGACCCCGACCTCGTCGCCCGCACCGCCGTGGATATCGGCCTCAAGGCGCTGAAGGGCGAGCTGCCCGCCGACTTCCCCAAGCTGGAGCTGACCACGCCCGCCGTGATCACTCAGGACAATGTCGACAAGTTCTACCGCAAGGACGCGGTGTTCTGA
PROTEIN sequence
Length: 323
MTKALPACALAAALMAGTFGMAAAADCKVGVAMYTLSAPYFAAQEAAAADQAKKAGCEVSTADGQNDMGKQISDVEDMVAKGVNLLILNPRDPEGLVAAANAATAAGVKVVVMDSSINTKANVITQVRSSNDQNGFLVGQWLAKKMQGKPAKILLLSGSQGNEVGRDRRLGVFRGLIEGQLVNEGKGGFEVLGQGWGGWSNEGGLKAAEDLLQAHPDANVVLGENDSMVLGAIKALQAAGKSDVLVLAAADGQKEALALIKEGKYGATGLNDPDLVARTAVDIGLKALKGELPADFPKLELTTPAVITQDNVDKFYRKDAVF*