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berkeley_reactor_200306_biofilm_scaffold_57697_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 4397..5287

Top 3 Functional Annotations

Value Algorithm Source
RpiR family transcriptional regulator n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KA41_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 295.0
  • Bit_score: 374
  • Evalue 5.60e-101
RpiR family transcriptional regulator {ECO:0000313|EMBL:KGM35822.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 292.0
  • Bit_score: 416
  • Evalue 2.40e-113
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 291.0
  • Bit_score: 370
  • Evalue 3.00e-100

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGTTGCGCGACCAGACCCAGACGCCCCGGCCCACGACCCAGAACATCCTGGAGGTGGTGCGCACGCTCCACGACGAGCTGCGCAAGTCCGAGCGCAAGGTCGCGGACCTCGTCCTCGCCGACCCGCAGCGCCTGCTCGGCGCCACCCTGGCCGAGACCGCCGGCTTCGCCGAGGTCAGCCAGCCCACGGTGATCCGGTTCTGCGTCGCCCTGGGCTGCGTCGGCTTCCAGGAGTTCAAGCTGCGCCTGGCCCAGAGCCTGGCGCTCGGCACGCCCGCCACCCATTCCGTGCTGCTCGGCTCCGATCCGCCCGAGGCGGTGGTGGAAAAGATCTTCGACTACACCATCACCAGCCTTGACTGGGCCCGGCATCATCTCGACCGGCCGGCGCTGGGGCGGGCCATCGCCATCCTCGAGGCGGCGCGCCAGATCGAGTTCTTCGGCTTCGGCGCCTCGGCCATCGTGGCGCGCGACGCCCAGCAGAAATTCCCGCTGTTCGGCGTGCCGTGCGGAGCGCAGCTCGATTCGCACCAGCAGATCATGGTCGCTTCGATGATGCGGCCGGGCGACGTCGCCGTGGTGATCTCCAACACCGGCCGCACGCGCTCGATCGTCGAGGTGGCGCGCACCGCTCGCGAGAACGGAGCCGAGGTGATCGGCATCATCGGCACGCCCGGCTCGGTGCTGGTCGAGCATTGCGACGTGGCGCTGGTGGTGGAGACGCTCGACAACACCGACATCTATACCCCGACCATGTCGCGCATCGCCGCGCTGGTGGTGGTCGACGTGCTCTCCACCGCGGTGGCGCTGCGCCGCGACGAGGCGCACGGCCAACGCTTCCGGCAGATGAAGCGCCGGCTGAACGAGCTGCGCTTCGTCGAGCGGATCTGA
PROTEIN sequence
Length: 297
MLRDQTQTPRPTTQNILEVVRTLHDELRKSERKVADLVLADPQRLLGATLAETAGFAEVSQPTVIRFCVALGCVGFQEFKLRLAQSLALGTPATHSVLLGSDPPEAVVEKIFDYTITSLDWARHHLDRPALGRAIAILEAARQIEFFGFGASAIVARDAQQKFPLFGVPCGAQLDSHQQIMVASMMRPGDVAVVISNTGRTRSIVEVARTARENGAEVIGIIGTPGSVLVEHCDVALVVETLDNTDIYTPTMSRIAALVVVDVLSTAVALRRDEAHGQRFRQMKRRLNELRFVERI*