ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_66949_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(4257..6344)

Top 3 Functional Annotations

Value Algorithm Source
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 683.0
  • Bit_score: 1006
  • Evalue 9.60e-291
DNA/RNA helicase, superfamily I n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQU8_MESAW similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 683.0
  • Bit_score: 1006
  • Evalue 6.80e-291
DNA/RNA helicase, superfamily I similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 683.0
  • Bit_score: 1006
  • Evalue 1.90e-291

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium australicum → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2088
ATGGCTGCACTCGAAGCGCGTCTGCCGACCCGCGGGGATCTCCTTGCCACGCTGAACGAAGGCCAGCGGCGCGCCGTCGTGCACGGCATCGGCACGGGCTTGCCGCCCGGGCCGCTGCTGGTCATCGCCGGCGCCGGCTCGGGCAAGACCAACACGCTCGCCCACCGGGTGTCGAACCTGATCGTCCACGGCGCCGATCCGCGGCGGATGCTGCTGCTGACCTTCTCGCGCCGGGCGGCGGCCGAGATGACCCGGCGGGTCGAGCGCATCGCGGCGCAGGCCATGGGCGCCGACGGCGAGGCACTGAGCGCAGGCCTCACCTGGGCCGGCACCTTCCACGCCGTCGGCGCCCGGCTGCTGCGCGACTATGCCGCCCTGATCGGCCTCGACCCCGGCTTCACCATCCACGACCGCGAGGATTCCGCCGACCTGATGAACCTGGCGCGCCAGGAGCTCGGCCTCGCCAGCCGCGAGAGCCGCTTCCCGACCAAGGGCACCTGCCTGGCCATCTATTCGCGCGTGGTCAACGCCCAGGCCGAGCTCGCCGAGGTGCTGCGCGCCGCCTTTCCCTGGTGCGCCGCCTGGCAGGAGGCGCTGCGCGGCCTGTTCGCCGCCTATGTCGAGGCCAAGCAGGCCAACAACGTGCTCGACTATGACGACCTCTTGCTCTGGTGGGCGCAGATGACGGCCGAGCCGGCCATCGCCGCCGAGATCGGCGGGCGCTTCGACCATGTCTTCGTCGACGAGTACCAGGACACCAACCGCCTGCAGGCCGCGATCCTCCTGGCCCTGAAGCCGGACGGAAGCGGCCTCACCGTGGTCGGCGACGACGCGCAGTCGATCTATTCCTTCCGCGCCGCCACGGTGCGCAACATCCTCGACTTTCCCGGCCATTTCAGCCCGCCGGCCGCCATCGTCACGCTGGAGCGCAACTATCGCTCCACCGAGCCGATCCTGGCCGCCGCCAATGCGGTGATCGCGCTCGCCGCCGAGCGCTTCACCAAGACCCTCTGGTCGGATCGCCCCTCGGCGCAAAAGCCGCGGCTGGTCACGGTGCCTGATGAGACGGGGCAGGCCGCCTATGTCGCCGGGCGCGTGCTGGAGAACCGCGAGGCCGGCACGGCGCTGCGCCAGCAGGCGGTGCTGTTCCGCGCCTCCAGCCATAGCGGGCCGCTCGAGGTCGAGCTGGTGCGCCGCAACATCCCCTTCGTGAAATATGGCGGCCTGAAGTTCCTCGACGCAGCCCATGTCAAGGACGTGCTCGCCGTGCTGCGCTGGGCCCAGAACCCGCGCGACCGGGTGGCCGGGTTCCGCGTGCTGCAGATCCTGCCGGGCATCGGCCCGACGGGCGCGGCGCGCATCCTCGACGCCGTGGCCGAGGATCCGGCGGCCGACCTCGCCGCGACCGAGCCCCCCGCCCGCGCGGCGGCGGACTGGCCCGCCTTCGCGGCAATGGCCGGGCATCTCAGATCGCGGGCCAGCCCCTGGCCGGCGGAGATCGAGCAGGTCCGCCTCTGGTACGAGCCGCATCTGGAGCGCATCCACGAGGACCCGGTGACGCGGCGGGCCGACCTGCTGCAGCTCGAGCAGATCGCTGGCAGCTATGCCACGCGCGAACGCTTCCTCACCGAGCTCACCCTCGATCCGCCCGATGCGACCAGCGACGAATCCGGCCCGCCCGACCGCGACGAGGACTATCTCATCCTCTCGACCATCCATTCGGCCAAGGGCCAGGAATGGCGCTCGGTCTTCGTGCTCAACGCCATCGACGGCTGCATCCCCTCCGATCTCGGGGTGGGCGAGGTTGCCGCCATCGAGGAGGAGCGCCGCCTGCTCTATGTGGCGATGACGCGGGCCAGGGACGACCTCGACCTCGTCATGCCGCAGCGCTTCTTCGTGCACCAGCAGGCGGCCCGCGGCGACCGCCACGTCTATGCCAGCCGCACCCGCTTCATCCCGGCCGCCATCCTCGACCGCTTCGAGCAGGCGGCGTGGCCGGCGGCCCGGCCTTCGCCGCATGCCGGCTCGGCGACGGCCGCCCGTGCCCCGGTCGACATCGGCGCGCGCATGCGCGGCATGTGGAAGTAG
PROTEIN sequence
Length: 696
MAALEARLPTRGDLLATLNEGQRRAVVHGIGTGLPPGPLLVIAGAGSGKTNTLAHRVSNLIVHGADPRRMLLLTFSRRAAAEMTRRVERIAAQAMGADGEALSAGLTWAGTFHAVGARLLRDYAALIGLDPGFTIHDREDSADLMNLARQELGLASRESRFPTKGTCLAIYSRVVNAQAELAEVLRAAFPWCAAWQEALRGLFAAYVEAKQANNVLDYDDLLLWWAQMTAEPAIAAEIGGRFDHVFVDEYQDTNRLQAAILLALKPDGSGLTVVGDDAQSIYSFRAATVRNILDFPGHFSPPAAIVTLERNYRSTEPILAAANAVIALAAERFTKTLWSDRPSAQKPRLVTVPDETGQAAYVAGRVLENREAGTALRQQAVLFRASSHSGPLEVELVRRNIPFVKYGGLKFLDAAHVKDVLAVLRWAQNPRDRVAGFRVLQILPGIGPTGAARILDAVAEDPAADLAATEPPARAAADWPAFAAMAGHLRSRASPWPAEIEQVRLWYEPHLERIHEDPVTRRADLLQLEQIAGSYATRERFLTELTLDPPDATSDESGPPDRDEDYLILSTIHSAKGQEWRSVFVLNAIDGCIPSDLGVGEVAAIEEERRLLYVAMTRARDDLDLVMPQRFFVHQQAARGDRHVYASRTRFIPAAILDRFEQAAWPAARPSPHAGSATAARAPVDIGARMRGMWK*