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berkeley_reactor_200306_biofilm_scaffold_66949_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(18157..18825)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6AZA5_RHILS similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 220.0
  • Bit_score: 322
  • Evalue 2.50e-85
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 220.0
  • Bit_score: 322
  • Evalue 7.00e-86
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACS54431.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 220.0
  • Bit_score: 322
  • Evalue 3.50e-85

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCAAAATTCTGGCCCGAGCTCCGATGCCGTCGCGACGACCGCGCCTGCGCGCGGGCGGCCGCGCGCGTTCGATCGGACCGCTGCGCTGGAGCAAGCGACCCGCCTGTTCTGGGCCAAGGGTTTCGAGGCGACGTCCATCGCCGACTTGACGCACGCGATGGGTATCGGTGCGCCCAGCCTCTATGCCGCCTTCCAATCGAAGGAAGCACTTTATGCTGAGGCGCTGCGCCACTATGCCGTGACCAACGAAGGATATGTTTGGGCCGGGTTTCACGCGGCTGGAACCGCGCGCGATGCCGTCCGGTCTTTCCTCGAGGATTCGGCCGCGGCGCTGACCGGCTGTGTCGCGGATATCCCCCGCGGCTGCATGGTGACGCTCTCGTCGGTCGGCAGCGAAGGTCACGCGGACTTGGGCGAGCTGGCCCGGTCGGCGCGCGCCGTCACCTTCGAACGGCTGTCGACCCGCCTCGACCGGGCGGTGGCGGAAGGCGAAATTCCGACCTCGACCGACCTCCACGCGCTCGCCCGCTTCGTGCAGACCGTTCAGAACGGCATGTCGATCCTCGCCCGCGACGGGGCAAGCCGCGCCGACCTGGAGGCGGTGGCGGATGTCGCCATGGCGGGATGGGACGTCCGGACCGCCGGGCCTGGGGATGGTGGCGGCTGA
PROTEIN sequence
Length: 223
MQNSGPSSDAVATTAPARGRPRAFDRTAALEQATRLFWAKGFEATSIADLTHAMGIGAPSLYAAFQSKEALYAEALRHYAVTNEGYVWAGFHAAGTARDAVRSFLEDSAAALTGCVADIPRGCMVTLSSVGSEGHADLGELARSARAVTFERLSTRLDRAVAEGEIPTSTDLHALARFVQTVQNGMSILARDGASRADLEAVADVAMAGWDVRTAGPGDGGG*