ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_66949_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 24465..25787

Top 3 Functional Annotations

Value Algorithm Source
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 438.0
  • Bit_score: 609
  • Evalue 3.70e-171
homoserine dehydrogenase (EC:1.1.1.3) similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 440.0
  • Bit_score: 600
  • Evalue 2.60e-169
Homoserine dehydrogenase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ERG1_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 440.0
  • Bit_score: 600
  • Evalue 9.30e-169

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGCAGGCTCCCCTCAAAATCGGCGTCGCGGGTCTCGGCACGGTCGGCGCCTCCGTGGTGCGGCTGATCGACCGGCGCGCCAATGCTCTCTCCGCCGCCTGCGGCCGGGCGATCACCGTCCAGGCCGTCTCCGCCCGCTCGCGCGGCCGCGACCGCGGCCTGCCCCTGGAGCGCCTGCGCTGGTTCGACGATCCGGTGGCGCTGGCGCGCGACCCCGGCATCGACGTCTTCGTCGAGCTGATCGGCGGCGAGGAGGGGCCGGCGCGCGAGGCGGTCACGGCGGCGCTCGATGCCGGCAAGCCGGTGGTCACCGCCAACAAGGCCCTGCTCGCCCGCCACGGCGTCGACCTCGCCCGCCGTGCCGAGAAGGCCGGCGTCGCCCTGAATTTCGAGGCCGCGGTCGCCGGCGGCGTGCCGATCGTCAAGACGCTGCGCGAGGGCCTGCTCGGCAACACGATCGAGCGCGTCTACGGCATCCTCAACGGCACCTGCAACTATATCCTCAGCCGCATGGAGGCGGAGGGCCTGAGCTTCGAGGCATGCCTGAAGGACGCCCAGCGCCTGGGCTACGCCGAAGCGGATCCGACCTTCGACGTCGGTGGCTTCGACACCGCCCACAAGCTCGCCATCCTCACCAGCCTCGCCTTCGGCACCGAGATCGACGCCGAGGCGATCCATGTGGAAGGCATCACCCAGATCACCCCGGCCGACCTCGCCGCGGCGGACGAGCTCGGCTACCGCATCAAGCTGCTCGGCGTCGCCACGCGCACCGAGGCAGGCGTGGAGCAGCGCGTCCACCCGACCATGGTGCCGAAATCGGCGCCGATCGCTCAGGTCAACGGCGTCACCAATGCCGTGGCCATCGACGCCGACGCGGTGCAGGAGCTGACGCTGGTCGGCCCGGGCGCCGGCGGCGAGGCGACCGCCTCGGCCGTGGTCGGCGACATCACCGACATCGCCCGCGGCTTCCGCCCGGCGCCCTTCGGCGTGCCTGCCGCCGAGCTGGCCAAGCCGGCGCGCGCGCCGATGCAGGCCCACAAGGGCGGCTATTACGTGCGCCTCTCCGTGGTCGACCGGCCCGGCGCGGCCGCGGCCATCGCCACGCGCATGGCCGAGCGCGCGATCTCGCTGGAATCGATCGTGCAGCGCCGCAAGGGCCGCGTCCACGGCGGCGACGACCCGGCCAAGGTGGCGGGCTCGGTGCCGGTGATCCTGATCACCTACGCCACCACCGAGGCGGCCATCCGTGCGGCGCTCGAGGCGATGATGAGCGACGGCTACATCGCCGAGACGCCGCAGACCATTCGCATCGAGCGCGAATAG
PROTEIN sequence
Length: 441
MQAPLKIGVAGLGTVGASVVRLIDRRANALSAACGRAITVQAVSARSRGRDRGLPLERLRWFDDPVALARDPGIDVFVELIGGEEGPAREAVTAALDAGKPVVTANKALLARHGVDLARRAEKAGVALNFEAAVAGGVPIVKTLREGLLGNTIERVYGILNGTCNYILSRMEAEGLSFEACLKDAQRLGYAEADPTFDVGGFDTAHKLAILTSLAFGTEIDAEAIHVEGITQITPADLAAADELGYRIKLLGVATRTEAGVEQRVHPTMVPKSAPIAQVNGVTNAVAIDADAVQELTLVGPGAGGEATASAVVGDITDIARGFRPAPFGVPAAELAKPARAPMQAHKGGYYVRLSVVDRPGAAAAIATRMAERAISLESIVQRRKGRVHGGDDPAKVAGSVPVILITYATTEAAIRAALEAMMSDGYIAETPQTIRIERE*