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berkeley_reactor_200306_biofilm_scaffold_56669_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19908..20531

Top 3 Functional Annotations

Value Algorithm Source
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IMS8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 147.0
  • Bit_score: 97
  • Evalue 9.30e-18
Uncharacterized protein {ECO:0000313|EMBL:KJC62267.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 147.0
  • Bit_score: 101
  • Evalue 1.20e-18
TPR repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 155.0
  • Bit_score: 88
  • Evalue 1.60e-15

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Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGCGCCTCTGGACACGTCTGGCCCTCTCCGTCGCGCTCGGCATCGCCCTGCCGGCTCCGGCCTTTGCCATGGGCACCGAGCCGCCGGCCGACGGCGACGCCAAGCCGGCGCCGTGCACCGAGACCGACAAGTCCAAATGCCCGGCGGCCGCCAAGCCCGGCGACGCCGCCAAGCCGACCGATGCCGCCAAGCCGGACGCGGCGCCGAAAGCGGCCGATTGCACCGAGACCGACAAGACCAAATGCCCGGCCAAGCAGGGCTTCCTCGAGCGCTATCACGACGCCGTGGCCCTGATCGATGCCCATCGCTACGAGGACGCGCTGACGGCGATGCAGGCGCTCGACGACGGCTCCTCGGCCGACGTGATCAACTATATCGGCTATATCCACCGCAAGCTCGGCCATATGGCGCAGGCGCAGATGTATTACGAGGCGGCGCTCCACATGAAGCCCAACCATCGCGGCGCGCTCGAATATTACGGCGAGTGGTACTGCATGATGGGCAATCTCGACAAGGCCCGGCAGAACCTCTCGACCATCGCATCCCTCTACGGCGCGGACAGCAAGGAATACACCGCCCTCGCCCATATGATCGCCGAGACGGCGGCCAAGACCAAGACCTGA
PROTEIN sequence
Length: 208
MRLWTRLALSVALGIALPAPAFAMGTEPPADGDAKPAPCTETDKSKCPAAAKPGDAAKPTDAAKPDAAPKAADCTETDKTKCPAKQGFLERYHDAVALIDAHRYEDALTAMQALDDGSSADVINYIGYIHRKLGHMAQAQMYYEAALHMKPNHRGALEYYGEWYCMMGNLDKARQNLSTIASLYGADSKEYTALAHMIAETAAKTKT*