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berkeley_reactor_200306_biofilm_scaffold_56669_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(27208..27870)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTM8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 197.0
  • Bit_score: 263
  • Evalue 1.80e-67
TetR family transcriptional regulator {ECO:0000313|EMBL:ESX83149.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 197.0
  • Bit_score: 263
  • Evalue 2.50e-67
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 199.0
  • Bit_score: 260
  • Evalue 3.20e-67

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGGCGGGACGGCCACGCGAGTTCGACCGCGACGAGGCGCTGGGGCGGGCGCGCGACGCCTTCTGGCGGCGCGGCTACGAGGGCACGTCGATGGCGGACCTGGTCGAGGCCCTCGGCATCGCCTCGGCCCGCATCTATGCCGCCTTCGGCTCGAAGGACGCCCTGTTCCGCGAGGCGGTCGGGCTCTACCAGGCGGGGGAGGGCGGCTTCGCCGACCGTGCCCTGGCCGAGGAGGGCAGCATCGGCATGGCGGTCGAGCGCATGCTGCACGAAGCCGTCATGCTCTACACACGCCCCGGCGGGCCGCCGGGATGCATGGTGGTCGCGGCCGCGACCAATTGCACGCCCGAGAACGAGGCCGTGGCGCACTGGCTCGCCGAGCGCCGACGGACGCGGGCCGCCGCCATCGCCGACCGGCTGCGCCGCGCCGCGGTGGAGGGCGAGGTCCGGCCCGGGACGGACGTGGCGGCTCTCGCCGATGCCCTCGCCGTCTTCCTGCACGGCCTGTCCGTGCAGGCGCGCGACGGCGTGCCCAGGGAGCGCCTGCTCGCCGCGCTGCCCGTCGCGCTGGCGCCGCTGCGCTCGGCGCTCGTCCCCAAGGCCGCATCGCACGACGAGCGACCGGCCGGATGCCCCGAGGAGAAGATCCCATGCACGAGATGA
PROTEIN sequence
Length: 221
MAGRPREFDRDEALGRARDAFWRRGYEGTSMADLVEALGIASARIYAAFGSKDALFREAVGLYQAGEGGFADRALAEEGSIGMAVERMLHEAVMLYTRPGGPPGCMVVAAATNCTPENEAVAHWLAERRRTRAAAIADRLRRAAVEGEVRPGTDVAALADALAVFLHGLSVQARDGVPRERLLAALPVALAPLRSALVPKAASHDERPAGCPEEKIPCTR*