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berkeley_reactor_200306_biofilm_scaffold_65599_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1584..1895

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDK6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 97.0
  • Bit_score: 148
  • Evalue 2.30e-33
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CCV14445.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 97.0
  • Bit_score: 148
  • Evalue 3.20e-33
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 99.0
  • Bit_score: 142
  • Evalue 6.00e-32

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Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGATCCGCCACTATATACCGGTCGAAGAAGCAGCTCGGGACTGGTTCAAGGATCCGGAATTCCGCGCGGCTTATGACGCCTTGGATGAGGAATTCGCGCTCGCCGAGGCTCTGATCAAGGCTCGAACTGCCGCCGCGATGACCCAGGCGGACGTGGCGAAGGCGATGGGCACGACACAGGCGGTCGTTGCCCGCTTGGAAAGCGGCCGCACCATGCCATCGACGCGCACGCTGCAAAGGTTCGCCAAGGCGACAGGCAACCGCCTGCGCATCAGTTTCGCACCGGCCAAGACCGCGCCGGTAGAGCGATAA
PROTEIN sequence
Length: 104
MIRHYIPVEEAARDWFKDPEFRAAYDALDEEFALAEALIKARTAAAMTQADVAKAMGTTQAVVARLESGRTMPSTRTLQRFAKATGNRLRISFAPAKTAPVER*