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berkeley_reactor_200306_biofilm_scaffold_65599_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5833..7344

Top 3 Functional Annotations

Value Algorithm Source
exodeoxyribonuclease VII large subunit (EC:3.1.11.6) similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 507.0
  • Bit_score: 595
  • Evalue 9.70e-168
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 507.0
  • Bit_score: 595
  • Evalue 4.80e-167
Exodeoxyribonuclease 7 large subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IEN0_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 507.0
  • Bit_score: 595
  • Evalue 3.40e-167

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Taxonomy

Methylobacterium nodulans → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1512
ATGTCCGATCTTCCCGCCGAATCGCCGTCCAATGCGCCCGAATGGTCCGTCTCCGAGCTGTCGCAGGCCCTCAAGCGCACGGTCGAGGAGGCCTATGGCTATGTCCGCGTGCGCGGCGAGATTTCCGGCTATCGCGGCCCGGTCGCCTCGGGCCATGCCTATTTCGCCCTGAAGGACGAAGGCGCCAAGATCGACGCCGTGGTCTGGAAGGGCACGCTCGCCCGGCTGAAGACGCGGCCCGAGGAGGGCATGGAGGTGATCGCCCATGGCCGGCTGACCACCTTCCCCGGCAAGTCCTCCTACCAGATCGTCATCGACCGGCTGGAGCCGGCCGGTCTCGGCGCGCTGATGGCGCTCCTGGAGGAGCGCCGCCGCAAATTCGCGGCCGAGGGCCTGTTCGACGAGGCGCGCAAGAAGCCGCTGCCCTATCTGCCGCAGGTGATCGGCGTCGTCACCTCGCCGACCGGGGCGGTGATCCGCGACATCCTGCACCGCCTCTCCGACCGCTTCCCGCGCCGGGTGGTGGTGTGGCCGGTGCGGGTGCAGGGCGAGACCAGCGCCGCCGAGGTCGCCGCCGCCATCGCCGGCTTCGGCGCCCTCGCTCCGGGCGGCCCCATACCGCGCCCCGACGTGCTGATCGTGGCGCGCGGCGGCGGCAGCCTGGAGGACCTGTGGTCCTTCAACGAGGAGGTGGTGGTGCGCGCCGCCGCGGCCTGCCCGATCCCGCTGATCTCGGCGGTCGGCCACGAGACGGACTGGACGCTGATCGATCACGTGGCGGATCGCCGGGCCCCGACGCCGACCGGCGCGGCCGAGATGGCGGTGCCGGTCAGGGCCGACCTCCTCGCCGATCTCGCCGATCTCGGCGGGCGGCTCACCGCCAGCACGCTGCGGCACATCGAGCGCCGGCGCAGCGACCTGCGCAACCTCGCTCGCGGCCTGCCCGGCGCCGAGGCGCTGCTGGCGACGCCGCGCCAGCGGCTCGACCTCACCGCCGGACGGCTGACGCAGGCGCTGATCCTCAATGCGCGGCGCCACCAGCAGCGCTTCGACGCGTTGTCGCGGCGGCTCCTGGCGTGCAGTCCCCGCGCCCGCCTCGAGATCGGCCGGGCGCGGCTGGCCTCCCTGGCCGAGCGGCTCGCTCCCCGCCTGCTGGCCCGCGAGGCGCACATCGGCCGCGAGCGGCTGCAGACCCTGTTCTCGCGACTCTCGGCGGTGGCGCAGACGCGCACCCATCGGCGGCGCGACGCCCTCACCCGCCTCGCCACCCTGCTGGAGGCCTATTCCTACCAGGGCGTGCTGAAGCGCGGCTTCGCGCTGGTGCGCGACGGCGGCGACCGGCCGGTGCGCGACGTCGAGACGGCGCGGGCGGCCGGCCTGCTCGACATCCAGTTCGCCGACGGCCGGGTGAGGGTGCGCAGCGAGGACGGCCCGCCCGCTCCCCCGTCCAGGCCGGCGATGCGGCGGACGCGCCCGGGCACCGACGTGCCGCAGAAGGGCCTGTTCGACTGA
PROTEIN sequence
Length: 504
MSDLPAESPSNAPEWSVSELSQALKRTVEEAYGYVRVRGEISGYRGPVASGHAYFALKDEGAKIDAVVWKGTLARLKTRPEEGMEVIAHGRLTTFPGKSSYQIVIDRLEPAGLGALMALLEERRRKFAAEGLFDEARKKPLPYLPQVIGVVTSPTGAVIRDILHRLSDRFPRRVVVWPVRVQGETSAAEVAAAIAGFGALAPGGPIPRPDVLIVARGGGSLEDLWSFNEEVVVRAAAACPIPLISAVGHETDWTLIDHVADRRAPTPTGAAEMAVPVRADLLADLADLGGRLTASTLRHIERRRSDLRNLARGLPGAEALLATPRQRLDLTAGRLTQALILNARRHQQRFDALSRRLLACSPRARLEIGRARLASLAERLAPRLLAREAHIGRERLQTLFSRLSAVAQTRTHRRRDALTRLATLLEAYSYQGVLKRGFALVRDGGDRPVRDVETARAAGLLDIQFADGRVRVRSEDGPPAPPSRPAMRRTRPGTDVPQKGLFD*