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berkeley_reactor_200306_biofilm_scaffold_65599_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(10238..11536)

Top 3 Functional Annotations

Value Algorithm Source
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 433.0
  • Bit_score: 463
  • Evalue 6.50e-128
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003159123 similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 427.0
  • Bit_score: 470
  • Evalue 1.40e-129
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EJW11182.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 427.0
  • Bit_score: 469
  • Evalue 2.60e-129

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGAGCCGATCCCTGCCCATCGGCCTCAGGCTGTACCGGCTCGGCGCGTCGGTGCTGGGCCTTGCGGCGCCGCTGTTCCTCGCCGTGCGCCGCGCCCGCGGCAAGGAGGACGGCGCCCGCATCGGCGAACGGCACGGCATTCCCGGCCTCGACCGGCCGGGGGGACCGCTGTTCTGGCTGCACGGCGCCAGCGTCGGCGAGACTCTGACCGTGCTGCCGCTGGCCGAGCGGCTGGTGGCGCGCGGCTGCACCGTGCTCGTGACGTCGGGCACGGTCACGTCGGCCGCCGTGCTGGCGCGGCGCCTGCCCCCGGGCTGCCTGCACCAGTTCGTCCCGCTCGACGTGCCCGCCTTCGTGCGGCGCTTCCTCCGGGCCTGGCGCCCGGATGTGGCGATCTTCGTGGAATCGGAGCTGTGGCCGGTGATGATCACCGAGGCCCACCGCCACAGGGTGCCGCTGGTGCTGGTCAACGGGCGGATGTCGTCGCGCTCCTTCGCCCGCTGGCGCCGCCTGCCGCGCACCATTGCCGCGCTGCTCGGCCGCTTCGACCTCTGCCTCGCCCAAAGCGCGGCGGATGCCGAGCGTTTCGCCGCCCTCGCGGCGCCGCGCGTCTCGGCGCCCGGCAACCTGAAGTTCGACGCCGCGCCGCTGCCCTTCGACGGCGCCGCGCTGGCCCGCCTGCAGGCGACGCTGCGGGGCCGGCCGGTCTGGGTCGCCGCCTCCACCCACGAGGGCGAGGAGGCCATCGCCGCCGCCGTCCACGCCCGCGTGCGCAGCGGCGTGCCCGACCTCCTCACCATCATCGTCCCGCGCCATCCCGAGCGGGGCGATGCCATCGCCGACGTGGCGGCCGGGCAGGGCTTCAACGTCCTGCAGCGCTCGCGCGGCTTCGAGCCCGACCGCGGCGTCGAGATCTATGTCGCCGATACGGTGGGCGAGCTCGGCCTGTTCTATCGCCTCGCCCGCATCGTCTTCGTCGGCGGTTCGCTGGTGCGCCACGGCGGCCAGAATCCGGCCGAGGCGGCGCGGCTCGGCGCGGCGGTCCTGCACGGGCCCCATACCGGCAATTTCGTCGATGCCTATGCCGCGCTCGACCGGCACGGCGGCGCCGCGGCGGTCGCGGACGGTGATGCGCTGGCGGCCGAGGTCGAGCGGCTGCTCGTCGATCCCGCGGCGGTGGGGGCCATGGCGGCGGCGGGCGAGCGGGCCGTTGCCGGCCTCGCCGGCGCGCTCGACCGGGTGGTCGGAGCGCTCGACCCCTATCTCGTCCATCTCGCCCTCAGCGGGAGCCGGCGGTGA
PROTEIN sequence
Length: 433
MSRSLPIGLRLYRLGASVLGLAAPLFLAVRRARGKEDGARIGERHGIPGLDRPGGPLFWLHGASVGETLTVLPLAERLVARGCTVLVTSGTVTSAAVLARRLPPGCLHQFVPLDVPAFVRRFLRAWRPDVAIFVESELWPVMITEAHRHRVPLVLVNGRMSSRSFARWRRLPRTIAALLGRFDLCLAQSAADAERFAALAAPRVSAPGNLKFDAAPLPFDGAALARLQATLRGRPVWVAASTHEGEEAIAAAVHARVRSGVPDLLTIIVPRHPERGDAIADVAAGQGFNVLQRSRGFEPDRGVEIYVADTVGELGLFYRLARIVFVGGSLVRHGGQNPAEAARLGAAVLHGPHTGNFVDAYAALDRHGGAAAVADGDALAAEVERLLVDPAAVGAMAAAGERAVAGLAGALDRVVGALDPYLVHLALSGSRR*