ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_65599_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 13897..14472

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003638BAA similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 192.0
  • Bit_score: 126
  • Evalue 2.20e-26
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 162.0
  • Bit_score: 102
  • Evalue 9.80e-20
Uncharacterized protein {ECO:0000313|EMBL:CCJ05980.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 162.0
  • Bit_score: 102
  • Evalue 4.90e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylocystis sp. SC2 → Methylocystis → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGGCGTCACTCAGCGTGCCGAACGCACGTGGCCGCGCCGGACCGACCCAGTCGGTCCGGCGCCCTGGCCGTCCCGATTCGTTTCGAGGTCGAGGATCCGCGTGCCGACGGCGGCCGGCGGCACATCGAGATCCTCGAGCATGCGGTGCAGATCGAGCGCAGCCGCGCCGGCGTCAGGATGCGCGTGGCCATCCCCTATCCCCTCTACGAGGGCGTCGCCCTGGAGGTCCGGCCGACGGCGGCGCACGGCGCACGCGTGCTCGTGCGCCTGGTGCACGAGGACCGCGACCTCGACGTGGTGCTGTTCGAGGCGTCGGACGACCACGACGTCGCGGCGGAGTGGCAATACTGGGCCAACCGCTTCTGCCTGCCGATGCTGGTGGCGGAGCTGGACGGCAGCTTTTCCGAGCCCTTCCCCCGCCTCGGCGCCTTGGCGATCGGCCGGGTGCGGCCGCGCCGCATGCCGTCCCACATCGCCCGGCGCCGGCCGCGCTTCCTGACGCGCCGGCGCACCGGCAGGCTGCCCAAGCACCCCAAGGTGCACCGCGAACGCGAGATCATCGCCCGGACGTGA
PROTEIN sequence
Length: 192
MRRHSACRTHVAAPDRPSRSGALAVPIRFEVEDPRADGGRRHIEILEHAVQIERSRAGVRMRVAIPYPLYEGVALEVRPTAAHGARVLVRLVHEDRDLDVVLFEASDDHDVAAEWQYWANRFCLPMLVAELDGSFSEPFPRLGALAIGRVRPRRMPSHIARRRPRFLTRRRTGRLPKHPKVHREREIIART*