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berkeley_reactor_200306_biofilm_scaffold_67262_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(3..6053)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Apolipoprotein A1/A4/E n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ETT5_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 27.6
  • Coverage: 2216.0
  • Bit_score: 714
  • Evalue 2.00e-202
apolipoprotein A1/A4/E similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 2216.0
  • Bit_score: 714
  • Evalue 5.80e-203
Apolipoprotein A1/A4/E {ECO:0000313|EMBL:ACK52437.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.6
  • Coverage: 2216.0
  • Bit_score: 714
  • Evalue 2.90e-202

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Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 6051
ATGGCGAACAAGTCGAAGGCGCAGGACCCGGCGGACGCGGCCCTGTCCGCGATCGAGGAGGCTCTCAACCTCGAAACGTCGACACCCGAGCAGGCGGATGCGGACGCCCGACCGAGCCTCCCCAATGTCGACGAAGGCTTCACGCTCGAAACCGCCGTGCCCCGCCAGCCGACCGAAGATCCGCCGCCTCGCGACGAGGAGCGTCCCGCCTCCGGCTTCGGCTCCCGCCGCACGCCGGCCAACGACGACCGCGAGAGCGTCGGCCAGCTGCTCTATGCCCTGCAGCGCAAGCCGCCGCGCACGCCCTATATCGTGGCCGCGCTGGTCGGGCTGCTCTGGCTGGCGGGCGGCGCTGCTGCCTTGCTGGCGCTGTTCGACCTGGCGCCGGCCGCCCTGGCCAGCATCGCCACCTATCGGGCCAATCCGGCCCTGATCGCCGGCTTCGTCGCGGTGGTGCTGCCGCCGGTGTTCTTCCTGATCATGGCCTCGATGATCTGGCGCGCGCAGGAGATGCGCTATGCCGCGCGCTCGATGACGCAGGTCGCCTTCCGTCTCGCCGAACCGGAGAACGTGGCGGCCGACGGCGTCGTCACCGTCGGCCAGGCCATCCGTCGCGAGGTCGCGGCCATGGGCGACGGCATCGACCGCGCCCTCGCCCGCGCCAGCGAGCTGGAGATCATGGTGCACAACGAGGTGTCGCTGCTCGAGCGCTCCTATTCGGAGAACGAGCTGCGCATCCGCTCCATCGTCGAGGACCTCACGGCGCAGCGCGAGGCGATCGTCAACAATGCCGACCGCGTCCGCTCGGCCATCGTGGTGGCTCACGAGGGCCTGACCCAGTCGCTGGGCGACGTCGCCGGCCGGATCACGACCGAGGTCGCCGACGCCGGCGCCCAGGTGATGCGCTCCTTCGGCGACCAGGGACGCGAGATCACCGGCGAGCTCGGCAAGGTCGGCAGCGAGATGGTCGAGGCGATGGGCCAGCGCGGCTCGGCCCTGATCGAGCGCATGACCACCACGGCTGAGGATGTCAACCGGACGCTCTCCTCCGCGTCCGGCCTGGTCACCGATACGCTCAACCAGCGCGCCGACGAAGTCACCAACCGTCTGGCGGCGACCTCCGACCTCGTCAACGAGACCTTCGCCGCCCGGGCCAACGAGCTCAGCGGCACGATGTCGGAGCGGGCCCGGGCCCTGAACGAGGCCCTGACCCAGAACAGCCAGAGGATCGTCGACGAGATCACCCAGCGCGGCACCGACGTCAACGAGACGCTGATCCGCACCGGGGAGTCCTTGACCCAGGCCTTCGGCGAAGGCTCGGAGCTGGTGACGAACTCGATCCGCGAGACCGGCTCGAACATGGTCGAGCAGATCGCCTCCAGCGTCGCCGAGGTCAACAACACTCTGAGGGCGACGGGCGACGCCGTGCTGGCCGAGCTGCAGACCCGCGGCGCCAACGTCACCGGCAAGCTGGACGATACGGCGACGCGCATCGCCGAGATCATCACCACCCGCGGCGGCGACCTCGCCGACCGCATCGCCGCCACCAGCGACCGCATCCACGAGACCATCGTGGTCAGCGGCGGCGACATCGACCGGCGCCTGTCGGAGACCGGCCAGTCGGTGGTCGCCGCCATCGAGGCGCGCACCGCCGACACGCAGGCCGCGGTTGCGGCCGCCTCCGAGATCATCGGCACGGTCTTCGTCAAGGAGGGCCACGGGCTCGCCGGCCTGCTGGCCCAGGCCGGCCGCGAGGCCGCCAATTCCCTGTCCTCGTCGGGCGAAGCGCTCGGCAAGGTGATCGAGGAGCGCAGCCAGGCCGCGGTGACGCAGATCAACACCGGCGTGCTCCGGCTCGAGACCACGGTCGACGCCCAGACCGAGGCCCTGGCCAAGACCATGGCCGACCGGCTGGAAGCCCATCGCCAGGGCAGCGCCGAGACCGCCAACGAGCTGCACGCCAAGCTGGACGGGCTGCTGTCGACGATCGAGGGCCGCAGCGCCAAGCGGGCCGAAGCCGTGCGCGGGGCCATCGAAGCGAGCCTCGCCGGCTTCGACGAGACCATCGCCGGCAAGGCGGCGGTGGTGCATGCCAATATCGACCAGCGCCTCGGCGCCTTCGAAGAGCGCTTCACGGCCGCTTCCGGCTCCGTCCAGGCCGAGCTCGACCAGCGCCTCGGCGCCTTCGAGGAACGCTTCTCGGCGATGTCGACGGCGACGCAGGGCGCACTCGACGAGCGCCTCGGCTCCTTCGAGCAGAGCCTGGCCCGGCTCTCCGCCCAGACCCAGGGCAGCCTCGACCAGCGCTTCGGCTCGTTCGAGCAGCGCTTCGCCGACAACGTGACCGCAGCCAACGCCACGCTCGAGCAGCGCCTGGGCGCCTTCGAGACCCGCTTCGCCGCGGTCTCGGCCACGGCCCATAGCGGCATCGAGCAGAATCTCGCCACCTTCGAGACGCGCTTCGCCGACAATGTCGGCGGCGTCCAGTCGGCGCTCGACCAGCGCCTCTCGTCCTTCGAGGAACGCTTCACCGGCAATGCGACGCAGGTGCAGTCGGCCTTCGACCAGCGCTTCGGCACCTTCGAGACCAGCTTCGCCAGCGGCACCGGGGCGCTGCAGGAGGCGCTCGACACCCGCCTCGCCACCTTCGAGGCGCATGTGGCGGCGAACACCGACGTGGTGCAGAGCGTGATCTCCGACCGCCTCAGCGCCTTCGAAAGCCGCTTCCAGGCGGACGCCGGCTCGGTGCAGTCGACGCTGGACGACCAGCTGCGCGCCTTCGAGACGGCGCTGGCGAGCCGCGTCGAGAGCGCCACCAAGGCGCTGGACGCTCGCATCGCCGCCCTGGAAGAGGTGGTCGACGTGCGCGCCACCGCCCTCGCCGGCCGCATCGGCGAGGATACCCGCTCGCTGAGCGAGGATATCGCCCAGCGCCTGCTCGGGTTCGAGAGCACGATCCGCGTGCACGGCAGCGCTCTGGTCGACCGCATCGACAACCAGATCTCCACCGCCACCGACACGCTGGAGGGCAAGCTCTTCAGCTTCGATCAGAGCTTCGGCTCCAAGTCGCGCGATGTCGCCGACACGCTCGAGGAGAAGCTGCAGCGCCTGGAGGAGAGCGTCGGGTCGCGCTCGCGGGAGATCGTGGACGCTCTCGACGAGAGGCTCACCGGCTTCGGCAGCAAGTCGCGCGAGATGGTGGAGTCCCTCGACGAGAAGCTGAACGGGTTCGACGAGCGGGTCGGCACCCGGTCGCGCGAGATCGCCGACACCCTCGACGAGAAGCTCAGCGGCTTCGACGAACGCGTCGGCACGAGGTCGCGTGAGATCGGCGACGCCCTCGACGAGAAGCTCGGCGGCTTCGACGAGCGCTTCGGCACCAGGTCGCGCGAGGTCACCGAGGCCCTCGACCACAAGCTGCGCAGCTTCGACGTGCGCGTGGCCACGCGCTCGCGCGACATCGCCAACGCGCTCGACGAGAAGCTGGCAGGCTTCGACCAGCGCGCCGGCGCCAAGGCCGAGGAGATCGCCGAGGCGCTCGAGGGCATGCTGCAGGGGTTCGACGGGCGTGTCGGCCTGACCGCTCGCCAGGTCGCCGAGAGCCTGGAGGAGAAGCTGCAGGGCTTCGATCAGCGCTACAGCGTCAAGTCGCGCGAGATCGCCCAGACCCTGGAGGAGAAGCTGCAGGCCTTCGACGACCGCTTCGGCTCGCGCTCGCGCGACATCGCCGACACGCTGGGCGGGGCGCTGCAGGACTTCGACGCCCGCTTCGACGGCAAGTCGCGCGAGATCGCCGAGAGCATGGCCCAGAAGCTCCAGGCCTTCGACGAGCGCTTCGGATCGACCTCGCGGGACGTCGCCGACACGCTCGACGACAAGCTCCAGATGTTCGACCAGCGCTTCGGCTCCAAGTCGCGCGAGATCGCCGACACGGTCGAGGACAAGCTCAACTTCATCGAGCAGCATTTCGGCTCCCGGGCACGGGAGATGGCCGACACGCTCGACGACAAGCTGCACGCCTTCGACGACCGCTTCGCCACCAAGACGACCGAGATCGCCGACACGCTGGACGGGCGCATCACCCGCATCGACCAGGGCCTCGACGCCCGCGCCCGCGCCCTCAACGAGACGCTGGCGGCACGCACGCTGGAGATGGCCCGCGTGCTCGGCGACGGCGGCAAGGAAGTCACCGTGGCGCTCGACACCAAGGCGCAGGAGATCTCCGAGCTGCTCGACGCCCGCTCGACCGCCATCGCCGCCTCGATTTCGGCCAAGGCGGACGACATCACCGGCCTGCTCACCAGCAAGAGCCTGCAGCTGACCGACCGGATCGCCGAGCAGTCGGCCACGCTCGCCGACCAGCTCGACAGCAGGAGCTCGATGATCTCCAACACCCTGTCGTCGAAGGCGATCGAGATCGCCGCGCAGTTCGACGACAAGAGCTCGCACATCGCCGACACGCTGGCCGGCAAGGTCGACGAGATCAACCGCACGCTCGGCTCGCGCGCCACCGAGGTCGCCAAGACCCTCGACATGCGCGTGGCGCATTTCGAGGACAACGTCATCGGCCGCCTCACCGAGGTGTCCCAGACCCTCGACGCCCGCGGCTCGCAGATCGCCGCGACGCTGCAGGAGAAGGTGCAGGCCGTCTCCGAGAGCCTGATGCAGAACGCCGCCGAGGTGGATGCGACGCTGTCGCGCCTCTCCGCCGATGTCGGCGTCACGCTCGGCAACCGCGCCGCCGAGATCAATGCCGTGCTGGGCAACCGCTCCAACGAGCTGGCGCAGATCCTGGACGAGCGCGGCAACGCCCTGGTCCAGACCATCTCGGCCCGCGGCAGCGCCATCACCAACGAGGTGGCCGATGCCGGCCTGATGGTGGTGCAGTCGCTGGAGGAGCGTGGCACGCGCATCGCCGCCGTGATCAGCGAGAAGGGCGGCGAGCTCGTCACCGCGCTCGCCGACAAGCGGGCGGAGCTCACGGCCTCGCTGGAGCTCTCCTCCGACACGCTGGCAGCGGCGATCGAGACGCGGGCCGGCCGCGCCGTCGGCGAGCTCGGCTCGGTGAACGACCGCATCCGCGTCGAGCTCGGCTCGCTGCTCGACCGGGTCGGCACCACCAACAAGAAGCTCACCGAGACGCTGGACGGCTCCGCCCGGTCGCTGGAGAGCATCGAGGGCGGCCTCAGCGAGCGGCTGGAAACCTTCCAGTCGACCATGAACGGCCTCGCCGACCAGGCGAACTCGGCGACCAGCCGCGTCGGCCACCAGGTGACGACGCTGCGCGAGATCTCGGGCGAGGTGCTCGGCGACGTCACCGCCCTCACCGGCCGGCTGGAGCAGCAGGCCTCTCAGCTCTCGCAGGCGGCGCAGGCCCTCGACCAGACGCAGGCGCGCGTCGACCGGGCGCTCGACGAGCGCCGGGCGGCGCTGGAATCCCTGGTCGGCGCCATCACCTCGAAGACCGAGACGATGGAGACGCTGCTGCGCTCCTTCTCCTCGACGGTGGAGGAGACGCTGGCCAATGCCGAGGCCAAGGCGAAGCAGGCCGGCACGTTGCTGGCCGACAACGCCAACACCACGGCGCATGCCATCGCCGAGCAGTTCGAGCTGATCCGCGCCACCACCGGCAAGGAGCGCGAGCGCACCTCCTCGTCGATGCGCGCCGCCTACGAGCAGGCGGTGGCCGAGGTCAACAACCTCTTCGGCAACGCCTCCGATCGGTTCTCCGAGGCGGCGCAGGAGATGCGCGGCATGGCCAAGACCATCCAGCAGGAGCTGGAAGCAACGCGCGCCGAGCTGCAGCGCGGCCTGATCGAGATCCCGCGCGAGACGTCGGAATCGACGGCGGCGATGCGCCGTGTCGTGGCCGAGCAGATCCAGGCGCTGAACGATCTCTCCGACATCGTGGCTCGCTCGGGCCGGACCTACGACGTGGTCGAGGCGCCGCGCCGGAGCGAGCCGGCGCGCCTGCCCGAGGCCGTGCTGCCGGCGAGCCTGACGCGTCCGATCGCCGCGCCGGAACCGGCGCCGCGCGCCCGAGCCGCCGAG
PROTEIN sequence
Length: 2017
MANKSKAQDPADAALSAIEEALNLETSTPEQADADARPSLPNVDEGFTLETAVPRQPTEDPPPRDEERPASGFGSRRTPANDDRESVGQLLYALQRKPPRTPYIVAALVGLLWLAGGAAALLALFDLAPAALASIATYRANPALIAGFVAVVLPPVFFLIMASMIWRAQEMRYAARSMTQVAFRLAEPENVAADGVVTVGQAIRREVAAMGDGIDRALARASELEIMVHNEVSLLERSYSENELRIRSIVEDLTAQREAIVNNADRVRSAIVVAHEGLTQSLGDVAGRITTEVADAGAQVMRSFGDQGREITGELGKVGSEMVEAMGQRGSALIERMTTTAEDVNRTLSSASGLVTDTLNQRADEVTNRLAATSDLVNETFAARANELSGTMSERARALNEALTQNSQRIVDEITQRGTDVNETLIRTGESLTQAFGEGSELVTNSIRETGSNMVEQIASSVAEVNNTLRATGDAVLAELQTRGANVTGKLDDTATRIAEIITTRGGDLADRIAATSDRIHETIVVSGGDIDRRLSETGQSVVAAIEARTADTQAAVAAASEIIGTVFVKEGHGLAGLLAQAGREAANSLSSSGEALGKVIEERSQAAVTQINTGVLRLETTVDAQTEALAKTMADRLEAHRQGSAETANELHAKLDGLLSTIEGRSAKRAEAVRGAIEASLAGFDETIAGKAAVVHANIDQRLGAFEERFTAASGSVQAELDQRLGAFEERFSAMSTATQGALDERLGSFEQSLARLSAQTQGSLDQRFGSFEQRFADNVTAANATLEQRLGAFETRFAAVSATAHSGIEQNLATFETRFADNVGGVQSALDQRLSSFEERFTGNATQVQSAFDQRFGTFETSFASGTGALQEALDTRLATFEAHVAANTDVVQSVISDRLSAFESRFQADAGSVQSTLDDQLRAFETALASRVESATKALDARIAALEEVVDVRATALAGRIGEDTRSLSEDIAQRLLGFESTIRVHGSALVDRIDNQISTATDTLEGKLFSFDQSFGSKSRDVADTLEEKLQRLEESVGSRSREIVDALDERLTGFGSKSREMVESLDEKLNGFDERVGTRSREIADTLDEKLSGFDERVGTRSREIGDALDEKLGGFDERFGTRSREVTEALDHKLRSFDVRVATRSRDIANALDEKLAGFDQRAGAKAEEIAEALEGMLQGFDGRVGLTARQVAESLEEKLQGFDQRYSVKSREIAQTLEEKLQAFDDRFGSRSRDIADTLGGALQDFDARFDGKSREIAESMAQKLQAFDERFGSTSRDVADTLDDKLQMFDQRFGSKSREIADTVEDKLNFIEQHFGSRAREMADTLDDKLHAFDDRFATKTTEIADTLDGRITRIDQGLDARARALNETLAARTLEMARVLGDGGKEVTVALDTKAQEISELLDARSTAIAASISAKADDITGLLTSKSLQLTDRIAEQSATLADQLDSRSSMISNTLSSKAIEIAAQFDDKSSHIADTLAGKVDEINRTLGSRATEVAKTLDMRVAHFEDNVIGRLTEVSQTLDARGSQIAATLQEKVQAVSESLMQNAAEVDATLSRLSADVGVTLGNRAAEINAVLGNRSNELAQILDERGNALVQTISARGSAITNEVADAGLMVVQSLEERGTRIAAVISEKGGELVTALADKRAELTASLELSSDTLAAAIETRAGRAVGELGSVNDRIRVELGSLLDRVGTTNKKLTETLDGSARSLESIEGGLSERLETFQSTMNGLADQANSATSRVGHQVTTLREISGEVLGDVTALTGRLEQQASQLSQAAQALDQTQARVDRALDERRAALESLVGAITSKTETMETLLRSFSSTVEETLANAEAKAKQAGTLLADNANTTAHAIAEQFELIRATTGKERERTSSSMRAAYEQAVAEVNNLFGNASDRFSEAAQEMRGMAKTIQQELEATRAELQRGLIEIPRETSESTAAMRRVVAEQIQALNDLSDIVARSGRTYDVVEAPRRSEPARLPEAVLPASLTRPIAAPEPAPRARAAE