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berkeley_reactor_200306_biofilm_scaffold_67262

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_biofilm_scaffold_67262_1
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..6053)
DNA (6051bp) protein (2017aa)
Apolipoprotein A1/A4/E n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ETT5_METSB
apolipoprotein A1/A4/E
Apolipoprotein A1/A4/E {ECO:0000313|EMBL:ACK52437.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
berkeley_reactor_200306_biofilm_scaffold_67262_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6477..6824
DNA (348bp) protein (116aa)
Hpt protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P5Z0_9RHIZ
Hpt protein {ECO:0000313|EMBL:EKF42746.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
berkeley_reactor_200306_biofilm_scaffold_67262_3
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7026..7346
DNA (321bp) protein (107aa)
2Fe-2S ferredoxin (FdII) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TN08_9BRAD
2Fe-2S ferredoxin (FdII) {ECO:0000313|EMBL:CCE07846.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
fdxB; 2Fe-2S ferredoxin
berkeley_reactor_200306_biofilm_scaffold_67262_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7343..8326
DNA (984bp) protein (328aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VM42_RHOPX
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADU45775.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
berkeley_reactor_200306_biofilm_scaffold_67262_5
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8349..9524)
DNA (1176bp) protein (392aa)
Major facilitator superfamily permease n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZVQ3_9PROT
probable 3-phenylpropionic acid transporter
Probable 3-phenylpropionic acid transporter {ECO:0000313|EMBL:BAQ17113.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
berkeley_reactor_200306_biofilm_scaffold_67262_6
bacterium YEK0313, Bacteria

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9828..10691
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEZ0_METS4
Chemotaxis phosphatase, CheZ {ECO:0000313|EMBL:CEJ13915.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
Displaying 6 items

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