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berkeley_reactor_200306_biofilm_scaffold_67262_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 7343..8326

Top 3 Functional Annotations

Value Algorithm Source
Mandelate racemase/muconate lactonizing protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VM42_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 324.0
  • Bit_score: 455
  • Evalue 3.60e-125
mandelate racemase/muconate lactonizing protein similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 324.0
  • Bit_score: 455
  • Evalue 1.00e-125
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADU45775.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 324.0
  • Bit_score: 455
  • Evalue 5.10e-125

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGACCATGCGGCTCTCGGTGCGGGTCGAGCGCTGGCCGATCGCCGGCGCCTTCACCATTGCGCGCGGCACCCGCACCGAGGCCGTGGTCGTCGTAGCCCGAATCGAGGACGGCGATGGGGCCGGGCAGGGCGAATGCGTGCCCTATGCCCGTTACGGCGAGAGCGTGGAGGGCGTCGTCGCGGCGATCGAGGCCATGGCGGAGCCGCTCGCCGCCGGGCTCGACCGCGCGGCGCTGCAGGCGGCCATGCCGGCGGGCGCGGCGCGCAACGCGCTCGACTGTGCCCTGTGGGACCTGGAGGCCAAGCGCAGCGGCCGGCCGGCCTGGCAGCTCGCCGGCCTGCCCGAGCCCGGCCCGCTGACCACCGCCTACACCCTGTCGCTGGGCGAGCCCGCCGCCATGGGCGAGGCCGCCGCCCGGGCGGCGCATCGCCCGCTCCTCAAGGTCAAGCTCGGCACCGCGGACGACGCCACGCGCATCGCCGCGGTCCGGGCCGCCGCGCCGGGCGCCCGGCTCATCGTCGATGCCAACGAGGGCTGGCGCGCCGCCGACCTGGAGCGCAACCTCACCGCCTGCGCCGAGGCCGGCGTCGTGCTGATCGAGCAGCCGCTGCCGGCCGCGGACGATGCGGCGCTGGCGCAGGTGAGGCGGCCGGTGCCGATCTGCGCCGACGAATCCCTGCACGATCGCGCCTCGCTGGCCGGCCTGGCCGGGCGCTACGACGCCATCAACATCAAGCTCGACAAGGCCGGCGGACTCACCGAGGCGCTGGCGCTGGCGGAGGCGGCGCAGGCCGTCGGCCTCGACCTGATGGTGGGCTGCATGGTCGGCACCTCCCTGGCGATGGCGCCGGCCCTGCTGCTGGCCCAGCGCGCCGCGGTCGTCGACCTCGACGGTCCGCTGCTGCTGGCCCGCGACCGCGAGCCGGGCCTGCGCTACGAAGGCAGCACGGTGTTCCCGCCACAGCCGGAGCTCTGGGGGTAG
PROTEIN sequence
Length: 328
MTMRLSVRVERWPIAGAFTIARGTRTEAVVVVARIEDGDGAGQGECVPYARYGESVEGVVAAIEAMAEPLAAGLDRAALQAAMPAGAARNALDCALWDLEAKRSGRPAWQLAGLPEPGPLTTAYTLSLGEPAAMGEAAARAAHRPLLKVKLGTADDATRIAAVRAAAPGARLIVDANEGWRAADLERNLTACAEAGVVLIEQPLPAADDAALAQVRRPVPICADESLHDRASLAGLAGRYDAINIKLDKAGGLTEALALAEAAQAVGLDLMVGCMVGTSLAMAPALLLAQRAAVVDLDGPLLLARDREPGLRYEGSTVFPPQPELWG*