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berkeley_reactor_200306_biofilm_scaffold_73177_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 6076..7326

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 412.0
  • Bit_score: 641
  • Evalue 8.30e-181
RNA-splicing ligase RtcB n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QWR1_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 412.0
  • Bit_score: 700
  • Evalue 6.30e-199
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 412.0
  • Bit_score: 641
  • Evalue 1.70e-181

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Taxonomy

Tistrella mobilis → Tistrella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
ATGTCCGAAGCGCGCACCTATGATTTCCTGAGCGAGGCGTTCGACGCGGCGCGGACGGCCAAGGCCGTGCCCGTGAAGATGTGGACGCGCGGCGTGCCGGTCGACGCATCCTCGATGCAGCAACTGCTGAACACCGCCGGCATGCCGTTCATCCACAAGTGGCTGGCGGTCATGCCCGACGTCCACTACGGCAAGGGCTCGACCATCGGCTCGGTGATCCCCACCGTCGGCGCCATCATCCCGGCCGCCGTCGGCGTCGACATCGGCTGCGGCATGATGGCGGTGCGCACCTCGCTCGTCGCGTCCGACCTGCCGGACACGCTGGCGCCGGTGCGGTCCGCCATCGAGCAGGCGGTGCCGCACGGGCGGACGGTCGGGCGCGGCGGACGCGACAAGGGCGCCTGGGGCGACCTGCCCGAGGCCACCGCGTCGGCCTGGGCCGGGCTCGACGCCGGTTTCGCGGCGATCGTCGCCAAGCACCCCAAGCTCGCCAGGGCCAACACGGCCAGCCATCTCGGCACGCTGGGCACGGGCAACCACTTCCTCGAGGTCTGCCTCGACGAGGCGGACCGGGTCTGGTTCGTGCTGCACTCGGGCTCGCGCGGGGTCGGCAACGCCATCGGCTCGTATTTCATCGAGCTGGCCAAGGCCGACATGCGCCGCTGGTACATCAACCTTCCCGACCAGGATCTCGCCTATTTCCCGGAGGGCACGACCCATTTCGACGACTATGTCGAGGCAGTGGAATGGGCGCAGACCTACGCGATGATGAACCGGCAGGTGATGATGCAGAACGCCATCGACGCCGCGCGGAGCGCGATCGCCACGCCTTTCGAGGCGCATCTCGAAGCGGTGAACTGCCATCACAACTACGTCGCGCGCGAGCACCACTATGGCAAGGACGTGCTGGTGACCCGCAAGGGCGCGGTGCGGGCGGCCGAGGGCGTGATGGGGATCATTCCGGGCTCGATGGGGGCCAGGACCTTCATCGTGCGCGACCGCGGCAATGCCGAGAGCTTCTGTTCGTGCTCGCACGGCGCCGGGCGGGTGATGTCGCGGACCGAGGCCCGGCGGCGCTTCACCGTGGCCGATCACGTGGCCGCGACGGAAGGGGTCGAATGCCGCAAGGACGAGGACGTCATCGACGAGACGCCCAAGGCCTACAAGGACATCGACGCCGTCATGGCGGCACAGGCCGATCTCGTCGAGATCGTGCACACGCTCCGCCAGGTCGTCTGCGTCAAGGGATGA
PROTEIN sequence
Length: 417
MSEARTYDFLSEAFDAARTAKAVPVKMWTRGVPVDASSMQQLLNTAGMPFIHKWLAVMPDVHYGKGSTIGSVIPTVGAIIPAAVGVDIGCGMMAVRTSLVASDLPDTLAPVRSAIEQAVPHGRTVGRGGRDKGAWGDLPEATASAWAGLDAGFAAIVAKHPKLARANTASHLGTLGTGNHFLEVCLDEADRVWFVLHSGSRGVGNAIGSYFIELAKADMRRWYINLPDQDLAYFPEGTTHFDDYVEAVEWAQTYAMMNRQVMMQNAIDAARSAIATPFEAHLEAVNCHHNYVAREHHYGKDVLVTRKGAVRAAEGVMGIIPGSMGARTFIVRDRGNAESFCSCSHGAGRVMSRTEARRRFTVADHVAATEGVECRKDEDVIDETPKAYKDIDAVMAAQADLVEIVHTLRQVVCVKG*