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berkeley_reactor_200306_biofilm_scaffold_73177_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(19434..20375)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D02CD1 related cluster n=1 Tax=unknown RepID=UPI0003D02CD1 similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 312.0
  • Bit_score: 387
  • Evalue 6.80e-105
Threonine dehydratase {ECO:0000313|EMBL:KGM32018.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 306.0
  • Bit_score: 409
  • Evalue 2.30e-111
pyridoxal-5'-phosphate-dependent protein subunit beta similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 312.0
  • Bit_score: 387
  • Evalue 2.50e-105

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGAACTTCGCCGACGTCGCCCAGGCAGCCGAACGCATCCGGGGGCACGTCCGGCGGACCCCGATGGTCCGTGCCGACCAGCTCTTCGCCCCGCTCGGCGTCGAGGACCTCTGGCTGAAGCTCGAATGCCTGCAGGTCACCGGCTCGTTCAAGGCGCGGGGCGCCACCAACCGCCTCCTCACCCTGCCGCCCGAGGTGCTGACCAGGGGCATCGTCGCCGCCTCGGGCGGCAATCACGGGGTGGCGACCGCCCGTGCCGCCCGGCTCGCCGGCGTGCCCGCGGCCATCTACCTGCCCGGGAACGCCGCGGCCTCGAAGATCGAGAAGCTGCGCGGCTGGGGCGCCGAGGTGCATGTCGGCGGATCGGTCTGGGACGAGGCGCACGAGCTCGCCCGGGCCGAGGCGGAGCGGCGCGGCGCCTATTATTTCCACCCCTTCGCCGACCGGCAGATCGTCGCCGGCCAGGGCACCGTCGCCCTGGAGATCATCGAGGATGTCGGTCCCTGCGACGTCTATCTCGTCGCCGTCGGCGGCGGCGGCCTGATCGCCGGCATGGCGACGGCGATCCGCGAGAAGAACCCGTCGGCCCGCATCATCGGCATCGAGCCGACGGGCTCGCCGACGCTGCATGACAGCCTGCGCGCGGGCGAGGTGGTGCGCCTGCCCGCGGTGACGACCCGCGTGGCGACCATGGCCTGCGGGCGCACCGACGAGAGCATCTTCGAGATCGTGCGGGACGCGGTCGAGCGGGTCGTCCTGGTCGAGGACGAGGCGCTCGAGGCGGCGGCCCGCTGGCTCTGGTTCGAGCTCGGCATCGCCGCCGACCTCAGCGGCGCGGCCTCGATCGCCGCGCTGATGACCGGGGCCGTGGCGATCCGGCCCGGCGAACGCGTCTGCGGCCTCGTCTGCGGCGCCGGTACGGAGGGCATGCAGGGCAGGTGA
PROTEIN sequence
Length: 314
MNFADVAQAAERIRGHVRRTPMVRADQLFAPLGVEDLWLKLECLQVTGSFKARGATNRLLTLPPEVLTRGIVAASGGNHGVATARAARLAGVPAAIYLPGNAAASKIEKLRGWGAEVHVGGSVWDEAHELARAEAERRGAYYFHPFADRQIVAGQGTVALEIIEDVGPCDVYLVAVGGGGLIAGMATAIREKNPSARIIGIEPTGSPTLHDSLRAGEVVRLPAVTTRVATMACGRTDESIFEIVRDAVERVVLVEDEALEAAARWLWFELGIAADLSGAASIAALMTGAVAIRPGERVCGLVCGAGTEGMQGR*