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berkeley_reactor_200306_biofilm_scaffold_73177_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 21563..22321

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein IclR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7N2_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 251.0
  • Bit_score: 275
  • Evalue 5.10e-71
Uncharacterized protein {ECO:0000313|EMBL:KGM32017.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 246.0
  • Bit_score: 293
  • Evalue 2.60e-76
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 251.0
  • Bit_score: 275
  • Evalue 1.50e-71

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGAAGACCGACAGCCCGTCCTACTCCGCCCCGGCCCTTGACAAGGGCCTCGACATCCTCGAGCTCCTGGCCGCGCGCGAGAGCGGGCTGTCGATGAAGGCGATCGCCGACGAGCTCGGCCGCTCGAAGAGCGAGATCTTCCGCATGCTGATGGTGCTGCTGGACCGCGGCTACATCGCCCGCGATGCGGCGACCGACGAATTCACGCTCACCAACCGCCTGTTCAACCTCGGCTTGCGCACGCCCAGGGTGAAGGACCTCCTGTCCCGGGCGGCGCCGATCCTGCGCCAGCTGGCGGAAGAGTGCGGCCACTCGCCCCATCTGGTGGTGGTCCATCACGGCGAGACCGTCACCATCGCCGCCGTATCCGGGGGCGCCGACATGTCCTTCACCCTGAAGCTGGGCTATGGGCGCGTGGCGGTCGACGCGACCTCCGGCCAGGTGATCCTGGCCTTCCAGCCGCCGGAGGTGCGCCGGCACATGGTGGAGGAAAGCCGGCGTCTGCTCGACCGCGACCTCGATGAAGGCGAGCTCGGCGAAGCCTTCGAGCGCATCCGCGAGCAAGGCTACGAGATGCACGAGAGCCGCGACTTCGTCGGCATCACCGACATCTGCTGCCCCGTGCTCGGCGGCAATGGCGAGGCCATCGCCTGCGTCATCATCTCCTATGTCAACCGCCGCGGACGCACCAGCCGCCATGCGGAGGTGCTGGACATGCTCCGGCAGAGCTGCCGGGCCATCGCAGAGGAGATCGCATGA
PROTEIN sequence
Length: 253
MKTDSPSYSAPALDKGLDILELLAARESGLSMKAIADELGRSKSEIFRMLMVLLDRGYIARDAATDEFTLTNRLFNLGLRTPRVKDLLSRAAPILRQLAEECGHSPHLVVVHHGETVTIAAVSGGADMSFTLKLGYGRVAVDATSGQVILAFQPPEVRRHMVEESRRLLDRDLDEGELGEAFERIREQGYEMHESRDFVGITDICCPVLGGNGEAIACVIISYVNRRGRTSRHAEVLDMLRQSCRAIAEEIA*