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berkeley_reactor_200306_biofilm_scaffold_73177_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(23016..24413)

Top 3 Functional Annotations

Value Algorithm Source
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Rhizobium sp. AP16 RepID=J2CQL1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 455.0
  • Bit_score: 662
  • Evalue 2.10e-187
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:EJK79289.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 455.0
  • Bit_score: 662
  • Evalue 3.00e-187
gatA1; amidase similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 455.0
  • Bit_score: 657
  • Evalue 1.90e-186

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1398
ATGCCCGCACCGCCGCCTTCGCTCGCCGACTGGACGGCCGGCCAGCTCCTCGCCGCCTTCCGCACCGGGTCGGTCACGCCGCTCGACGCATGGGCCGCCGTCGAGGCCCGCATCGCCGCCGCGGAGCCGAAGATCGCCGCGCTCTACGCCTATGCTCCCGAACGCGCCCGCCGCGAGGCCGCCGCCTCGACCGAGCGCTGGCGGCGCGGCGCGCCGATCGGGCCGCTCGACGGCATGCCGGTCACGGTCAAGGAGCTGATCGCCACCGAGGGCGATCCGGTGCCGCGCGGCTCGGCGGCGAGCGAGCTTGCGCCGGCCAGGCAGGACGCGCCGGCCGCCGCGCGGCTGCGCGAGGATGGCGCCATCCTGTTCGCCAAGACCACCTGCCCGGACTACGGCATGCTGTCGTCCGGACTGTCGAGCTTCCACCCCCTGACGCGCAATCCCTGGAATCTCGCGAAAAATCCCGGCGGCTCGAGCTCCGGCGCCGCGGCCGCCGCGGCGGCCGGCTATGGACCGCTGCATGTCGGCACCGATATCGGCGGCTCGATCCGCATTCCCGCCGGCTGGACCGGCCTGTTCGGCTTCAAGCCGAGCAATGGCCGCGTTCCCATCGACCCCTACTATCCCGGCCGCTGCGCCGGGCCGATGACCCGGACGGTCGCCGATGCCGTCATGATGATGCCGACGCTGTCGCGTCCGGACTGGCGGGACGCCACCAGCCTGCCGCCGACGCCGCTGGACTGGCCGGGCGAGGCGCCCGACGTCAGGGGCCTTCGCCTCGGCCTGATGCTCGATGCCGGCTGCGGCCTGCCGGTCGACCGCGAGATCCTCGATGCGGTGACGGCGGCGGCAAGGCGCTTCGAGGCGGCCGGCGCGATCGTCGAGGCGGTTCCCCCGGTGCTCACCGCGGCGATGCTCGACGGCCTCGACGATTTCTGGCGCGCCCGCGCCTGGGCCGAGATCTCGCTCCTGCCGCCGGAGCGCCAGCGCCGGATCCTGCCCTATATCCACGCATGGGCTACGAAGGCCGAGACCATGTCCGGCGTGCGGGCCGTCCGGGGCCATGATCAGACCCTGGCGATGCGCCAGGCCTGCGCCCGCCTGTTCCAAAGCGTCGACGCCGTGCTGTCGCCGACGAACCCGGTCGTGTCCTTTCCGGCCGAGCATGCCTCGCCGACCAACGACCCGGACCGCCCCTTCGAGCACATCGCCTTCACCGTGCCGTGGAACATGTCGGAGCAGCCGGCCGCCTCGATCAATTGCGGCTTCTCCCGCGCCGGCATGCCGATCGGCCTGCAGATCGTCGGCCCGCGCTTCGGCGACGTCCTGGTCCTGCAGCTCTCGCTGACCCACGAGGCCTGGCAGGAGCCGATCGCCTGGCCGGCGGTGGGGTGA
PROTEIN sequence
Length: 466
MPAPPPSLADWTAGQLLAAFRTGSVTPLDAWAAVEARIAAAEPKIAALYAYAPERARREAAASTERWRRGAPIGPLDGMPVTVKELIATEGDPVPRGSAASELAPARQDAPAAARLREDGAILFAKTTCPDYGMLSSGLSSFHPLTRNPWNLAKNPGGSSSGAAAAAAAGYGPLHVGTDIGGSIRIPAGWTGLFGFKPSNGRVPIDPYYPGRCAGPMTRTVADAVMMMPTLSRPDWRDATSLPPTPLDWPGEAPDVRGLRLGLMLDAGCGLPVDREILDAVTAAARRFEAAGAIVEAVPPVLTAAMLDGLDDFWRARAWAEISLLPPERQRRILPYIHAWATKAETMSGVRAVRGHDQTLAMRQACARLFQSVDAVLSPTNPVVSFPAEHASPTNDPDRPFEHIAFTVPWNMSEQPAASINCGFSRAGMPIGLQIVGPRFGDVLVLQLSLTHEAWQEPIAWPAVG*