ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_73177_35

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(40865..41161)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Oceanimonas smirnovii RepID=UPI000367E64B similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 95.0
  • Bit_score: 66
  • Evalue 1.40e-08
Uncharacterized protein {ECO:0000313|EMBL:ERG44756.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas rubra ATCC 29570.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.0
  • Coverage: 94.0
  • Bit_score: 63
  • Evalue 1.30e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoalteromonas rubra → Pseudoalteromonas → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGGCAATTTCGGTTTCCTGTCCTTGGCGTCTGCTTGACGAGGGCGATGAGCACGATGCTTTCCAGCGCCGCTATGATATTGAAGTGGCCGGCGCACATCCGCTTGCACGATCAAGTGGAATGATCGTCGCTCGAAGTGACGCAAATGACGACGTTTTGGTTGAGACGAGCGACGGACGCTTCGCCATTGTTCACCTGACCTGGAGCGATAGTGGTCTCGGCTATCCGCGCTTTGCTCTCTACGAGACCGATGAAGCTGTCTCCCGCTTCATCAAGGACGAAATCGACCGGAGTTGA
PROTEIN sequence
Length: 99
MAISVSCPWRLLDEGDEHDAFQRRYDIEVAGAHPLARSSGMIVARSDANDDVLVETSDGRFAIVHLTWSDSGLGYPRFALYETDEAVSRFIKDEIDRS*