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berkeley_reactor_200306_biofilm_scaffold_87643_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(13014..13328)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDK6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 100.0
  • Bit_score: 133
  • Evalue 7.60e-29
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 98.0
  • Bit_score: 136
  • Evalue 2.60e-30
XRE family transcriptional regulator {ECO:0000313|EMBL:CDN54373.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 98.0
  • Bit_score: 136
  • Evalue 1.30e-29

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Taxonomy

Neorhizobium galegae → Neorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGACGCGGGAGTTCATTCCCATCGAAGAAACCGTCGCCGAATGGCGCGGGGATCCAGAATACGTTGCCGCCTATGATTCGCTCGAAGAGGAGTTCGCATTGGCCGAAGCTCTTATCGAGGCCCGCGGTGCTGCGCACATGACGCAGGAGCAGGTGGCGAAGGCCATGGGCGTGACGCAGAAAGCCGTGGCCAGGCTCGAGAGCGGCCGCAGCATGCCTTCGACCCGAACCTTGAAGCGCTATGCCGAGGCAACCGGCACGCGCCTGCGGATCAGTTTCGAGCGGCCTCGTACGGTGCCTGCACCGGCTCGCTAG
PROTEIN sequence
Length: 105
MTREFIPIEETVAEWRGDPEYVAAYDSLEEEFALAEALIEARGAAHMTQEQVAKAMGVTQKAVARLESGRSMPSTRTLKRYAEATGTRLRISFERPRTVPAPAR*