ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_87643_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(17170..18144)

Top 3 Functional Annotations

Value Algorithm Source
Probabe gentisate 1,2-dioxygenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I9Y3_AZOC5 similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 318.0
  • Bit_score: 391
  • Evalue 4.90e-106
gentisate 1,2-dioxygenase similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 318.0
  • Bit_score: 391
  • Evalue 1.40e-106
Probabe gentisate 1,2-dioxygenase {ECO:0000313|EMBL:BAF88437.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 318.0
  • Bit_score: 391
  • Evalue 6.80e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azorhizobium caulinodans → Azorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGAGTCAAGCCGGTCAAGCCGCCGCACGCAAGGCGCCGACGATCGACATGGCCGAGATGCCGGTGCAGCGTCCGGCCGAGGCGGCCGGGCCCACCGAGGCGCGGGCCCGCTTTTTCAATTCCGGCAACGCCTTCAACGTCAAGCTGCCGCCGGTGCCGGCCGCGCGCTTCCTCGACGAACCCGCCCGGGCCCTCGCCGCGACCGGGACCGGCTTCATCGCCTGCGACCAGTCGGCCGCGATCGGCGCGGCCTTTCCGGCGACGACGCCGCTGATGCTGGCGCGCTACGCCTCGATCGCCCCGCACGACCGGCTCGCCGCCGATTTCGCCGCCACCGGAGCGATCTGGTACGTGATCCGCGGCTCGGGCCGGGCCAGCGCTGCCGGCGAGGCCTTCGCCTGGGGCGAGGGCGACGTCTTCCTCATCCCCGGCGGCAGCGGCGCGGAGCTCACGGCCGGCGCCGAGGGTGCCGTGCTCTGGGTGGTGACCAACGAGCCCCAGCTCGCCTTCGACCGGCTGCGGCCGGCGGCCGGCCCGGACGCGCCGGTCGACCTCGTGCACTATCCCGCCGCGGAGATCGCCGGGCAGCTCCAGAAGGTGGTCGAGGCCTCGCAGAACGCCACCACATCCGGCATTGCCCTGATCTTCTCCTCCGAGCGGCAGGAGGCGAGCCGCAACATCACGCCGACGCTGACCCTGTCGCTCAACACCGTGCCGGCGGGCGAGCAGCAGCGGGCGCACCGGCACAATTCGGCGGCGATCACCCTGATCCTCAAGGGTGAGCGCTGCCATTCCATGGTCGGCAGCCGGCGTTGCGACTGGGCGCCCTTCGCCACGCTGGTGACGCCGGCGACCGAGCCGCACTCGCACCACAACGACAGCGACGAGCGCGCCCTGTTCCTGATCGTCCAGGATGGCGGGCTGCACTACCACGCCCGCACGATGGGCTTCACCTTCCTGGAGCCAGCGCCGTGA
PROTEIN sequence
Length: 325
MSQAGQAAARKAPTIDMAEMPVQRPAEAAGPTEARARFFNSGNAFNVKLPPVPAARFLDEPARALAATGTGFIACDQSAAIGAAFPATTPLMLARYASIAPHDRLAADFAATGAIWYVIRGSGRASAAGEAFAWGEGDVFLIPGGSGAELTAGAEGAVLWVVTNEPQLAFDRLRPAAGPDAPVDLVHYPAAEIAGQLQKVVEASQNATTSGIALIFSSERQEASRNITPTLTLSLNTVPAGEQQRAHRHNSAAITLILKGERCHSMVGSRRCDWAPFATLVTPATEPHSHHNDSDERALFLIVQDGGLHYHARTMGFTFLEPAP*