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berkeley_reactor_200306_biofilm_scaffold_87643_38

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(34671..35732)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine ABC transporter ATP-binding subunit n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HJR7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 354.0
  • Bit_score: 299
  • Evalue 2.70e-78
spermidine/putrescine ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 348.0
  • Bit_score: 299
  • Evalue 7.70e-79
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHC23226.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 348.0
  • Bit_score: 299
  • Evalue 3.80e-78

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Taxonomy

Mycobacterium neoaurum → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGGCCGACATCACCCTCACGCGCCTCTCCAAGGCCTATGGTCCGCTGACCGTCCTCGATGCGGTGAGCCTCGCGGTGCCGGACGGCTGCTTCTGCGCTCTTCTCGGGCCGTCCGGCTCGGGCAAGACCAGCCTGCTGCGCGCCATTGCCGGCTTCGTCGAGCCCGATGCCGGCACGGTGGCGATCGGCGGGCGCGACGTCACCGCGATGCCGCCCTACCAGCGCGACGTCGGCATCGTGTTCCAGAGCTACGCGCTGTTCCCGCATCTCAGCGTGTTCGACAATGTCGCCTTCGGCCTGAGGATGCGGCGGCTCGGGGCCGAGGAGATCGCCGGGCGGGTCGGCCGCATGCTGGCGCTGGTCGGCATGGAGGCGCTGGCGCAGCGCAAGCCGGCGCAGCTCTCCGGCGGCCAGCAGCAGCGCGTCGCCCTCGCGCGCGCCCTGGTGATCCGGCCCAAGGTGCTGCTGCTCGACGAGCCGCTGAGCGCGCTCGACCGCAAGATCCGCGAGGAGATGCGCGACGAGATCAAGCGGCTGCACCGCGAGACCGGCATCACCACCATCATGGTCACCCACGACCAGGAGGAGGCGATCGACCTCGCCGACGAGCTGGTGCTGATGCACGACGGCGCCATCCACCAGCGCGGCGCGCCTGATGAGATCTACCACCATCCCGCCAGCCGCTTCGTGGCGGATTTCATGGGCGGGCGCCCGCTGCCGCCGGGCGTGCTGGAGCAGCGCGCCGGCATGCCGCTGCTGCGGATCGAGGGGCTGGAGATCGCGCTCGCCGGGTCGCCGCCGGCCGTGTCCGGCGCGGCCGTGCAGGCGGTGGTGCAGCCCGAATATGTCCGCGTCCGGGCCATGCCGAAGGGCGAGCCCGGCACGGGGCTCGTCGGCCGGGTGCGGGCGGTGAGCGTCTTCGGCGCGGTGGCGCGCGCCGATGTGGACGTCGCCGGCGTGGTGCTGCCGGCGCTGATGTTCTCGGGCGATGTCCGGGCCATCGCGGTCGACGACCTCGTCGCCGTCGCGATCGATCCGGCCGGCATCCACTGCTTCGCCTGA
PROTEIN sequence
Length: 354
MADITLTRLSKAYGPLTVLDAVSLAVPDGCFCALLGPSGSGKTSLLRAIAGFVEPDAGTVAIGGRDVTAMPPYQRDVGIVFQSYALFPHLSVFDNVAFGLRMRRLGAEEIAGRVGRMLALVGMEALAQRKPAQLSGGQQQRVALARALVIRPKVLLLDEPLSALDRKIREEMRDEIKRLHRETGITTIMVTHDQEEAIDLADELVLMHDGAIHQRGAPDEIYHHPASRFVADFMGGRPLPPGVLEQRAGMPLLRIEGLEIALAGSPPAVSGAAVQAVVQPEYVRVRAMPKGEPGTGLVGRVRAVSVFGAVARADVDVAGVVLPALMFSGDVRAIAVDDLVAVAIDPAGIHCFA*