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berkeley_reactor_200306_biofilm_scaffold_95231_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(9780..10448)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PS98_RHOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 205.0
  • Bit_score: 132
  • Evalue 4.70e-28
pdhR; GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 205.0
  • Bit_score: 132
  • Evalue 1.30e-28
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABN79214.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.0
  • Coverage: 205.0
  • Bit_score: 132
  • Evalue 6.70e-28

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Taxonomy

Rhodobacter sphaeroides → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGAACGCCGTGCTCTCCCTCGATCAAGCAGCGCTCGCGCCGCTCAGCTCCGCGACGCTCGCCGACCAGGTCGCGGACCGGATCGTCGAGGCGATCGCCGGCCGACGGCTTGCTTCGGAGGCGCGGCTGATCGAGACCGAGCTGGCGGCGGCGCTGCATGTCAGCCGCGTCCCGGTGCGCGAGGCCATCCGGATCCTGACCAGCCAGGGCATCGTCGTCGCCAACCCGCGCCGGGGCGTGCGTGTCGCCACCTTCGATGCGGCCTGGGCCCGCCAGCTTCACGACGCCCGCGTCGCCATCGAGCGCCTGGGCGCGCATCTGGCGGCGGAGATCTGCCGGCGCGATCCATCGGCCGTGACCCGGCTCGAGGCTTGCGTTGCGGGGATCGAAGCTGCGAAGGGCGACTGGCTGTCGGTCAACCGGGCGGACATCGCCTTCCACGCGACGCTGTTCGAGATCGCCGGCAGCCCGCTGATGCTCACCCTATGGCACGCCATCTCCCGGCACGTGCTGATCATGTTCTCGATCGAGACCTACCGGGACGTCGACTTCGACCGCGTGGTGAAGGAGCACCGCGTCTACATCGACGCGCTGCTGCACGAGACCCCGCAGGGGATCGACGAGGAGATCGACCGGCATGTCGCCGGCCTGCGGACCTTCGAATTCTAA
PROTEIN sequence
Length: 223
MNAVLSLDQAALAPLSSATLADQVADRIVEAIAGRRLASEARLIETELAAALHVSRVPVREAIRILTSQGIVVANPRRGVRVATFDAAWARQLHDARVAIERLGAHLAAEICRRDPSAVTRLEACVAGIEAAKGDWLSVNRADIAFHATLFEIAGSPLMLTLWHAISRHVLIMFSIETYRDVDFDRVVKEHRVYIDALLHETPQGIDEEIDRHVAGLRTFEF*