ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_95231_160

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 165993..166733

Top 3 Functional Annotations

Value Algorithm Source
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A9N5_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 242.0
  • Bit_score: 275
  • Evalue 2.90e-71
glycerophosphoryl diester phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 242.0
  • Bit_score: 275
  • Evalue 8.30e-72
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ADH88811.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 242.0
  • Bit_score: 275
  • Evalue 4.10e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGGTCGACTGGATCGCCGCCCGGCCCGTCGCCCATCGCGGCCTGCACGACGCGGCAGCCGGCGTGATCGAGAACACGGCGGCAGCGTTCCAGGCCGCCGTGGACGGCGGCTACGCCATGGAATGCGACGTGCAGATCTCGGCCGACGGCGAGGCCATGGTGTTCCACGACGACACGCTCGACCGGCTGATGCGGGCGAGCGGGCGGGTCGATGCCTATCCGGCGGCAGCGCTGCGGGCCCTGCCGATGAAGGCCGGGCGCGATGGGATGATCACGCTGGGCGAATTGTGCGACCTCGTCGGCGGCAGGAGCCCGCTGATCGTCGAGGTCAAGGCGTCCTGGAGCCGGGACCGGCGGCTGGAGCAGCGCGTCGCCGCCGTCTTGAAGGCCTATGCCGGACCGGTTGCCGTGATGTCGTTCGATCCCTGGTCCGCCGCCGCCTTCCGCACGCTGGCGCCGAACCTGCCGCGCGGCGTCGTGCAGGAAAGCCTCTACGACGATCCGGAATGGAGCATGCTGACGCCCGGCCGGAAATGGGCGCTCGGCTCGCTCCTGCACCTGCCCTGGTCGCGGCCGCATTTCCTGGCCTGGTACGTCCGGGACCTGCACCACCGGGCGCCGCGCCTGGCTCGCAGGCTGCTCGGCCTGCCGATGCTGACCTGGACGGTGCGCACGCCGCAGGACCAGGCCCGGGCAGCGCTCTATGCCGACCAGATGATCTTCGAGGGTTTCAGAGCTTGA
PROTEIN sequence
Length: 247
MVDWIAARPVAHRGLHDAAAGVIENTAAAFQAAVDGGYAMECDVQISADGEAMVFHDDTLDRLMRASGRVDAYPAAALRALPMKAGRDGMITLGELCDLVGGRSPLIVEVKASWSRDRRLEQRVAAVLKAYAGPVAVMSFDPWSAAAFRTLAPNLPRGVVQESLYDDPEWSMLTPGRKWALGSLLHLPWSRPHFLAWYVRDLHHRAPRLARRLLGLPMLTWTVRTPQDQARAALYADQMIFEGFRA*