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berkeley_reactor_200306_biofilm_scaffold_95231_168

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(173199..173603)

Top 3 Functional Annotations

Value Algorithm Source
methylmalonyl-CoA epimerase (EC:5.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 134.0
  • Bit_score: 222
  • Evalue 4.60e-56
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:ACL59020.1}; EC=5.1.99.1 {ECO:0000313|EMBL:ACL59020.1};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 134.0
  • Bit_score: 222
  • Evalue 2.30e-55
Methylmalonyl-CoA epimerase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IUW2_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 134.0
  • Bit_score: 222
  • Evalue 1.60e-55

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Taxonomy

Methylobacterium nodulans → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGATCGGCCGGCTCAACCATGTGGCCATCGCGGTGCCCGACATCGAGGCCGCCGCCGCGATCTATCGCGACGGTTTCGGTGCCACGGTCTCGGCGCCCCGCGGCCTGCCCGAGCACGGCGTCACCGTGGTGTTCGTCGATCTGCCCAACACCCGCGTCGAGCTGATGCAGCCGCTCGGCGAGGCGTCGCCGATCGCAAAATTCCTCGAGCGCAACCCAGGGGGCGGCCTGCACCATCTCTGCTACGAGGTCGAGGACATCCTCGCCGCCAGGGATCGGCTGGCCGCGGCCGGGGCCCGGGTGCTCGGCTCCGGAGAGCCTCGGATCGGAGCGCATGGCAAGCCGGTCCTCTTTCTCCATCCCAAGGATTTCGCCGGCACGCTGGTGGAGCTGGAGGAGGCTTGA
PROTEIN sequence
Length: 135
MIGRLNHVAIAVPDIEAAAAIYRDGFGATVSAPRGLPEHGVTVVFVDLPNTRVELMQPLGEASPIAKFLERNPGGGLHHLCYEVEDILAARDRLAAAGARVLGSGEPRIGAHGKPVLFLHPKDFAGTLVELEEA*