ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_111575_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 9255..9563

Top 3 Functional Annotations

Value Algorithm Source
Possible selenoprotein, W-related family n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YFL5_MOBAS similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 95.0
  • Bit_score: 163
  • Evalue 6.80e-38
SelT/selW/selH selenoprotein domain protein {ECO:0000313|EMBL:KFC66568.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 94.0
  • Bit_score: 164
  • Evalue 4.30e-38
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 97.0
  • Bit_score: 157
  • Evalue 1.40e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGACCCAGCCCGCCAGCAAGCCCCGCATCGCCATCACCTATTGCACCCAGTGCCAATGGCTGCTGCGCTCGGCCTGGATGGCGCAGGAGCTGCTCTCGACCTTCGGCCCCGATCTCGGCGAGGTGGCGCTGATCCCGGCGACCGGCGGCGCCTTTCAGATCGACTATGACGGCCAGACCATCTGGGAGCGCAAGCGCGACGGCGGCTTCCCCGATTCCCGCGCGCTGAAGCAGCTCGTGCGCGACCGCCTCGACCCCGGGCGGGACCTCGGCCATGTCGACCGGTCGCGGGGAACGGGGGAGGGATGA
PROTEIN sequence
Length: 103
MTQPASKPRIAITYCTQCQWLLRSAWMAQELLSTFGPDLGEVALIPATGGAFQIDYDGQTIWERKRDGGFPDSRALKQLVRDRLDPGRDLGHVDRSRGTGEG*