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berkeley_reactor_200306_biofilm_scaffold_111575_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 9734..10039

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003687BC3 similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 98.0
  • Bit_score: 164
  • Evalue 5.10e-38
Putative integral membrane protein {ECO:0000313|EMBL:EJN08943.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 98.0
  • Bit_score: 163
  • Evalue 9.40e-38
membrane protein similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 98.0
  • Bit_score: 162
  • Evalue 4.20e-38

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Taxonomy

Bradyrhizobium sp. YR681 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGTCCGCCAAGTCCACCGCGAGCTGCCTCCTGCTGGCCGGCGCCCTGACCACCGCGCTCGCCACGCTTGCCGCCGCTGCCCCCCTGACCAAGGCCGAAGCCGACGCGGCACTCTCCGCCGGCAAGCAGAAGTGCTTCGGCGTGGCCCTGAAGGGCCAGAACGACTGCGCCGCCGGCCCCGGCACCACCTGCCAGGGCACGTCGACCGTCGATTTCCAGGGCAATTCCTGGAAGTTCGTCCAGGGCGGCACGTGCGAGTCGATCGTCTTGCCGAACGGCAAGCACGGCTCGCTGACGGCGCTCTGA
PROTEIN sequence
Length: 102
MSAKSTASCLLLAGALTTALATLAAAAPLTKAEADAALSAGKQKCFGVALKGQNDCAAGPGTTCQGTSTVDFQGNSWKFVQGGTCESIVLPNGKHGSLTAL*