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berkeley_reactor_200306_biofilm_scaffold_111575_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 19640..20119

Top 3 Functional Annotations

Value Algorithm Source
NrdR family transcriptional regulator n=1 Tax=Xanthobacteraceae RepID=UPI00036D4C81 similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 159.0
  • Bit_score: 257
  • Evalue 5.40e-66
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 154.0
  • Bit_score: 256
  • Evalue 1.30e-65
nrdR; transcriptional regulator NrdR similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 155.0
  • Bit_score: 255
  • Evalue 7.50e-66

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAAATGTCCCTATTGCGGCGGCCTGGAGACGCAGGTCAAGGACAGCCGCCCGACCGAGGATGCGACCTCGATCCGCCGCCGCCGGGTCTGCCCGGACTGCGGCGGGCGCTTCACCACCTTCGAGCGGGTGCAGCTGCGCGAACTCACCGTGGCCAAGCGCTCCGGACGCAAGGTGCCGTTCGACCGCGACAAGCTGCAGCGCTCGGTCGAGATCGCCCTGCGCAAGCGCCCGGTGCCGGAGGAGCGCATCGAGCGGCTGGTCAACGGCCTGGTGCGGCAGATCGAGAGCCTCGGCGAGAACGAGGTCACCTCCGAGCAGATCGGCGAATTGGTGATGGAGGGCCTCAAAAACCTCGACGACATCGCCTATGTGCGCTTCGCGTCGGTGTATCGCAATTTCCGCGAGGCGAAGGATTTTGAGGCGTTCCTGGGCGAATTGTCGACCGAAGAGGCCAAGGACGCCTCGCTGGATGAGTGA
PROTEIN sequence
Length: 160
MKCPYCGGLETQVKDSRPTEDATSIRRRRVCPDCGGRFTTFERVQLRELTVAKRSGRKVPFDRDKLQRSVEIALRKRPVPEERIERLVNGLVRQIESLGENEVTSEQIGELVMEGLKNLDDIAYVRFASVYRNFREAKDFEAFLGELSTEEAKDASLDE*