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berkeley_reactor_200306_biofilm_scaffold_111575_32

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(29361..29678)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=IHFA_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 105.0
  • Bit_score: 171
  • Evalue 2.60e-40
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 104.0
  • Bit_score: 172
  • Evalue 1.60e-40
ihfA; integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 105.0
  • Bit_score: 171
  • Evalue 7.20e-41

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 318
ATGGCGGGAAACACCGTCACAAGGGCGGACCTCTGTGAAGCCGTCTATCAGAAGGTCGGATTGTCGCGGACCGAGTCGGCCCAGCTGGTCGAGCGGGTGCTGCAGGAAATCACCGACTGCCTGGAGAAGGGCGAGACGGTGAAGCTGTCCTCGTTCGGGTCGTTCATCGTCCGCTCCAAGGGCCAGCGCATCGGCCGCAACCCCAAGACCGGCGAGGAGGTGCCGATCGCTCCGCGCCGCGTCATGGTGTTCAAGCCCTCCAACATCCTCAAGGCCCGCATCAACGGGCTGGTCGTCGAGGGCGAGGAGGAGGAGTGA
PROTEIN sequence
Length: 106
MAGNTVTRADLCEAVYQKVGLSRTESAQLVERVLQEITDCLEKGETVKLSSFGSFIVRSKGQRIGRNPKTGEEVPIAPRRVMVFKPSNILKARINGLVVEGEEEE*