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berkeley_reactor_200306_biofilm_scaffold_111575_46

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(43112..44773)

Top 3 Functional Annotations

Value Algorithm Source
Bifunctional protein : sensor, cNMP-binding domain-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y3G0_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 545.0
  • Bit_score: 783
  • Evalue 9.80e-224
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 545.0
  • Bit_score: 783
  • Evalue 2.80e-224
Bifunctional protein : sensor, cNMP-binding domain-like protein {ECO:0000313|EMBL:AEG92434.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 545.0
  • Bit_score: 783
  • Evalue 1.40e-223

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Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1662
ATGGCGACGGGCAGCGACATCGATCTCACCGACCCCTATACCGGGCGGGAGGCACAGACCTTCCCGCGCCTCGGCGCGGAGATGGCGCGCCGCATCGCGGCCTACGGCGCCGAGGAGCGCATCCCGGCCGGCACGCTGCTGTTCGAGCGCGGCCAGCGCAGCGTCGATTTCTTTTTCGTGCTCGAAGGTTCGATCGAGGTCTTCGACCACGACATTCACGGCCGCGACCAGGTCTTCGCCGTTCATTCCGAGCGCCAGTTCACCGGCGAGCTCGACCATTTCAACGACCGCCGCATCCTGGTCTCGGGCCGCACCGGCGCCGACAGCCGCATCGTGCGCATCCATCGCGCCGATTTCCGCCGCCTGGTCACGGCCGAGCCGGATATCGGCGAGGTCATCATGCGCGCCTTCATCCTGCGACGGGTCGGGCTGATCCGCCAGGCGCATGGCGGCGTCGTGCTGGTCGGCCCGGCCCACGGCGCCGACACGCTGCGCCTGCAGCGCTTCCTGGTGCGCAACGGCTACCCCTTCCGCCTGCTCGACAGCGACACCGACCCCGGCGCCGGGAGCTTTCTCGCCTGCTTCGAGATCGCGCCCGAGCAATTGCCCGTGGTGATCGGCCAGGACGAGCAGGTGCTGCTCAACCCCTCGACCGAGGCGCTCGCTGACGATCTCGGCCTGACGGAGCGGCTCGATCCCGACAAGGTCCACGACGTCGCCGTGGTCGGCGCCGGACCGGCGGGCCTGGCCGCCGCGGTCTATGCCGCGTCCGAAGGCCTCGCCACCATCGTCATCGAGGGCGTGGCGCCGGGCGGGCAGGCCGGGACCAGCTCCAAGATCGAGAACTATCTCGGCTTTCCCACCGGCATTTCCGGCCAGGCCCTGGCCGGGCGGGCCCAGATCCAGGCGCAGAAGTTCGGGGCGCGGCTGGCGATCTCGCGCCATGCCGTGCGCCTCGCCTGCGACGAGGCGCCCTATCGCCTCGTCCTCGACGACGGCCAGGTGGTGCAAGCCCGTGCGATCGTGGTCGCCACCGGCGCGCGCTACCGCAAGCTCGACGTGCCGGACTATGACCGCTTCGAAGGCCAGGGCATCCATTATGCCGCGACCGCCATGGAGGCGGCGCTGTGCAGCGGCGAGGAGGTGGTCGTGGTCGGGGGCGGCAATTCCGCCGGCCAGGCCGCCATGTTCCTGTCGCGCAGCGTCGCCCATGTCCACATCCTGGTCCGGGCCGAGGGTCTCGCCGCCACCATGTCGGATTATCTGGTCCAGCGCATCGCCAGCTCGCCGAAGATCACCCTGCATGCGCGCAGCGAGATCACCACGCTCACCGGCGACCGCACGCTGCGCGAGGTCACCTGGACCAGCCGGCCGAGCGGCGAGAACCGGACGCGCCGCTGCGGCAACGTCTTCGTCATGATCGGCGCCCAGCCCAACACCGACTGGCTGGCCGGCTGCCTCGACCTCGACGCCAACGGCTTCGTGCGCACCGGCCAGGATGCCGCCGGCATGGCCCTCGCCTCCCCCTTTGCCACCACCAGGCCCGGCGTGTTCGCCGTCGGCGACGTGCGCTCCGGCTCGGTCAAGCGCGTCGCCTCCGGCGTCGGCGAAGGCTCGGTGGTGGTGGCGGCGATCCACCAGTTCCTGCACCCGGGGCCTTAG
PROTEIN sequence
Length: 554
MATGSDIDLTDPYTGREAQTFPRLGAEMARRIAAYGAEERIPAGTLLFERGQRSVDFFFVLEGSIEVFDHDIHGRDQVFAVHSERQFTGELDHFNDRRILVSGRTGADSRIVRIHRADFRRLVTAEPDIGEVIMRAFILRRVGLIRQAHGGVVLVGPAHGADTLRLQRFLVRNGYPFRLLDSDTDPGAGSFLACFEIAPEQLPVVIGQDEQVLLNPSTEALADDLGLTERLDPDKVHDVAVVGAGPAGLAAAVYAASEGLATIVIEGVAPGGQAGTSSKIENYLGFPTGISGQALAGRAQIQAQKFGARLAISRHAVRLACDEAPYRLVLDDGQVVQARAIVVATGARYRKLDVPDYDRFEGQGIHYAATAMEAALCSGEEVVVVGGGNSAGQAAMFLSRSVAHVHILVRAEGLAATMSDYLVQRIASSPKITLHARSEITTLTGDRTLREVTWTSRPSGENRTRRCGNVFVMIGAQPNTDWLAGCLDLDANGFVRTGQDAAGMALASPFATTRPGVFAVGDVRSGSVKRVASGVGEGSVVVAAIHQFLHPGP*