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berkeley_reactor_200306_biofilm_scaffold_111575_51

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(48422..49363)

Top 3 Functional Annotations

Value Algorithm Source
Nucleoside-diphosphate-sugar epimerase n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NRZ8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 302.0
  • Bit_score: 318
  • Evalue 3.90e-84
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EHQ58009.1}; TaxID=745014 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium HIMB55.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 302.0
  • Bit_score: 318
  • Evalue 5.40e-84
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 312.0
  • Bit_score: 258
  • Evalue 2.30e-66

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Taxonomy

gamma proteobacterium HIMB55 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGGCCGAGGACGTGGTGCTGGTGACGGGGGCCGGCGGCTGCATCGCCGCCTGGGTGATGAAGGACCTGCTGGCGGCGGGCGCCGGGGTGGTCGGCTTCGATCTCAGCGACAACAAGCGTCGGGCCGGCCTCGCCATGCCGGAGGCGGATGTCGCCCGCATCGCCTGGGAGCTCGGCGACATCGCCGACGGCGAGCGCCTGCGCGAGGTCGCGGCCCGGCACGGGGTCACCGCCATCATCCACCTGGCGGCGCTGCAGGTGCCGTTCTGCAAGGCCGATCCGGTGGCCGGCGCCAAGGTCAACGTGCTCGGCACCGTCAATGTCCTGGAGACCGCCCGCCATCTCGGCATCCGGCGCCTGGCCTATGCCAGCTCCATCGCGGTGCAGGGCATGGGCGAGGACAGCCCCTGGCTCGCCACGCTCTACGGCGCCCACAAGGCCTGCTGCGAGGCGATGGCCAAGGTCTACTGGCAGGACTGGCAGGTCCCCAGCATCGGCATCCGCCCCGGCGTGGTCTACGGCCCGGGCCGCGACCAGGGCATGAGCGCGGCGCCGACCGTCGCCATGCTGGCCGCCGTCACCGGCTCGGCCTACGACATCCCCTTCACCGGCCCCTTCCCCTTCCTCTATGTGCGCGAGGCTGCCGCAGCCTTCGTGCAGGCCGTGGCCGAGGATCGCACCGGGGCCGGCGTGTTCGACCTCAACGGCGTCGCCTCCACCATCGAGGACGTGACGGGGATGATCCGCGGCCATGCGCCGGCCGCCGCCGTCGGCAGCCGCGGCGCCCCCTTCCCCTTTCCGGCCGAGCTCGCCGACGCGCCGCTCGCCGCCGCGATCGGCGACTATCGCAAATGGCCGCTGGAGGCCGGCGTCGCCGAGACGATCGCCCTGTTCCGGGATCTGGTGGCCGCCGGGAGGCTGGCGGCGGCCGACGTGCGCTGA
PROTEIN sequence
Length: 314
MAEDVVLVTGAGGCIAAWVMKDLLAAGAGVVGFDLSDNKRRAGLAMPEADVARIAWELGDIADGERLREVAARHGVTAIIHLAALQVPFCKADPVAGAKVNVLGTVNVLETARHLGIRRLAYASSIAVQGMGEDSPWLATLYGAHKACCEAMAKVYWQDWQVPSIGIRPGVVYGPGRDQGMSAAPTVAMLAAVTGSAYDIPFTGPFPFLYVREAAAAFVQAVAEDRTGAGVFDLNGVASTIEDVTGMIRGHAPAAAVGSRGAPFPFPAELADAPLAAAIGDYRKWPLEAGVAETIALFRDLVAAGRLAAADVR*