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berkeley_reactor_200306_biofilm_scaffold_111575_90

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(94080..94553)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D00FA0 related cluster n=1 Tax=unknown RepID=UPI0003D00FA0 similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 161.0
  • Bit_score: 175
  • Evalue 2.60e-41
Uncharacterized protein {ECO:0000313|EMBL:CDX36744.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 156.0
  • Bit_score: 181
  • Evalue 5.20e-43
putative protein yidB similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 157.0
  • Bit_score: 171
  • Evalue 1.80e-40

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGGGACTTTTCGACGACGCCCTGAAGAACGCCGTGCCCGACGGCAACCTCACCAAGCCTCTGATCATCGCCGCCGGCGCGCTGATCCTCGGCAAGATGCTGAGCGGCCGCAGTGCGCCCCAGGAGGCCCAGCCGGCGCCGCAGCCCGTGCCGCAGGCGCCGCCTCCCGGCGCCGCGCCGGCGGGCGACGACGGCGGCCTGCTCGGCGGCCTCGGCGGCCTGCTCGGCAAGCTGCAGCAGGGCGGCCTTGCCGACGCGGCCAACAGCTGGGTCGGCACCGGCCAGAACCAGCCGGTGCAACCGGGCCAGCTCGGCCAGGCGCTCGGCCAGAGCACGATCAGCGACCTCGCCAAGCAGGCGGGCATCAGCGAGCAGGACCTGCTCAACGGCCTGTCGCAGGTCCTGCCCGGGCTGATCGACAAGCTGACGCCGAACGGGCGCGTCCCGACGCATTCGGAGCTCGGCAGCTTCTAG
PROTEIN sequence
Length: 158
MGLFDDALKNAVPDGNLTKPLIIAAGALILGKMLSGRSAPQEAQPAPQPVPQAPPPGAAPAGDDGGLLGGLGGLLGKLQQGGLADAANSWVGTGQNQPVQPGQLGQALGQSTISDLAKQAGISEQDLLNGLSQVLPGLIDKLTPNGRVPTHSELGSF*