ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_111575_98

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(102361..103755)

Top 3 Functional Annotations

Value Algorithm Source
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 463.0
  • Bit_score: 653
  • Evalue 1.40e-184
fumarate hydratase n=1 Tax=Methylopila sp. M107 RepID=UPI00035DDC2C similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 462.0
  • Bit_score: 664
  • Evalue 5.60e-188
class II fumarate hydratase similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 461.0
  • Bit_score: 647
  • Evalue 1.50e-183

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGACCGAAACCCGCACCGAAACCGACAGCTTCGGCCCGATCGCCGTCCCGGCGGACCGCTACTGGGGCGCCCAGACCCAGCGCTCCCTGCAGAATTTCCGCATCGGCGAGGAGAAGATGCCGCGCCCGATCGTCCACGCCCTCGGGCTGATCAAGCTGGCGGCGGCACGGGCCAACCGGGCGCTCGGCGCGCTCGACCCGTCGCTGGCCGACGCGATCGAGGCGGCGGCCCGCGAAGTCGCCGACGGCAAGCTGGACGCGGAGTTCCCCCTGGCGGTGTGGCAGACCGGCTCCGGCACGCAGAGCAACATGAACGCCAACGAGGTGATCGCCAACCGCGCCATCGAGCAGCTCGGCGGCACGCTCGGCTCCAAGACGCCGATCCACCCGAACGACCACGTCAATCGCGGCCAGTCGTCCAACGACACGTTCCCGACCGCCATGCACGTGGCGGCGGCGATGGAGATCCATGGGCGCCTCCTGCCGCAGCTCGAGGCGCTGCATCGCACCCTGGACGCCAAGGCCGTCGCCTTCGCCGGGATCATCAAGATCGGCCGCACCCATCTCCAGGATGCGACTCCGCTGACGCTCGGCCAGGAATTCTCCGGCTATGCCGCCCAGGTCGAGAACGGCATCCGGCGCGCCCGGCAGGCGCTGGAGGAGCTGATGCCGCTCGCCCAGGGCGGCACCGCGGTCGGCACCGGCCTCAACACGAAGACCGGCTTTGCCGAGCGCATCGCCGCCGAGCTCGCCGGGCTGACCGGCCTGCCCTTCCGCACGGCGGCCAACAAGTTCGAGGCGCTGGCGACGCATGATGCGATCGTCGCCGCCCACGGTGCCCTCAACACCCTGGCGGTCGGCCTGTTCAAGATCGCCAACGACATCCGCCTGCTCGGCTCGGGGCCGCGGGCCGGCATCGGCGAGCTCGTGCTGCCGGAAAACGAGCCGGGATCCTCGATCATGCCGGGCAAGGTCAATCCGACGCAGTGCGAAGCCATGACCATGGTCTGCACCCGGGTGTTCGGCAACCACGCCGCCGTGACCTTCGCCGGCAGCCAGGGGCACCTGGAGCTCAACGTCTACAAGCCGGTGATCGCCGACGCGGTGCTGCAGTCGGTTCGCCTGCTCGCCGACGCGGCCGACAGCTTCCGCGAGCATTGCCTCGAAGGGCTTGCCGCCGACGAGGCCCGCATCGGCGATCTGATGTCGCGCTCCCTGATGCTGGTGACGGCGCTCGCCCCGGTGGTCGGCTACGACAATGCCGCGCGCATCGCCAAGCAGGCGCATCACAACGGCACCACGCTGCGCGAAGAGGCGCTCGGCTCCGGCCTGGTCGACGCCGCCACCTTCGACGCGACGGTCGATGCCGCGCGCATGATCCAGCCCGATGCCTGA
PROTEIN sequence
Length: 465
MTETRTETDSFGPIAVPADRYWGAQTQRSLQNFRIGEEKMPRPIVHALGLIKLAAARANRALGALDPSLADAIEAAAREVADGKLDAEFPLAVWQTGSGTQSNMNANEVIANRAIEQLGGTLGSKTPIHPNDHVNRGQSSNDTFPTAMHVAAAMEIHGRLLPQLEALHRTLDAKAVAFAGIIKIGRTHLQDATPLTLGQEFSGYAAQVENGIRRARQALEELMPLAQGGTAVGTGLNTKTGFAERIAAELAGLTGLPFRTAANKFEALATHDAIVAAHGALNTLAVGLFKIANDIRLLGSGPRAGIGELVLPENEPGSSIMPGKVNPTQCEAMTMVCTRVFGNHAAVTFAGSQGHLELNVYKPVIADAVLQSVRLLADAADSFREHCLEGLAADEARIGDLMSRSLMLVTALAPVVGYDNAARIAKQAHHNGTTLREEALGSGLVDAATFDATVDAARMIQPDA*