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berkeley_reactor_200306_biofilm_scaffold_111575_104

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 109383..110318

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI000377E99A similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 300.0
  • Bit_score: 468
  • Evalue 5.10e-129
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:AID28135.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 300.0
  • Bit_score: 468
  • Evalue 7.20e-129
putative spermidine/putrescine ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 277.0
  • Bit_score: 466
  • Evalue 5.50e-129

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGAAGACTCTCGCTGGAACGGTGGGCGAGGACGTCGCCGTCGCGACGGGGGGATCGGCAGCGCCGGTCCGGCCCGCCGCGGGCCGGCGTGCCGGCTCGCGCTCCGCCTATTGGCTGGTCGCCCCCGGCGTCGCCTGGATGGCGCTGTTCCTGGTCCTGCCGATCGCGATGATCCTCTACGTCTCCTTCTGGACGCAGACGACCTTCGCCATCCAGCCGATCCTCACCACCAGGAGCTGGGTGACCTTCTTCACCAGCGGCACCTATCTCGACGCGCTCTGGACCACGATCCGCATCTGGCTGACCGTGCTCGCCGCCACCCTCCTCGTCGGTTATCCCACAGGCCTCTTCGTCGGCCTGTTCGTCAGGAACAAGACGCTGCAGACCGTGCTGCTGACGCTGTGCGTCATCCCGTTCTGGACCTCGTTCCTGATCCGGGTGCTGGCCTGGCGCCCGATGCTCGGCAAGGAAGGCGCGATCAACATCGTGCTGCAATGGCTCGGCCTCACCAATGCGCCGATCGAGGCGCTGCTGTTCTCCGACCTCTCCGTGGTGATCGGCATGACGCAGATCTACTGCGTGTTCATGGTCGGTCCGATCGCCTTCATGCTCGGGCGCATCGACCCGAACATCATCGAGGCCGCCCGCGACCTCGGCGCCGGCTTCGGTCGCATCTTCCGCACGATCATCCTGCCCTTGTCGCTGCCCGGCGTGGTCGTCGGCTCGATCTTCGTCTCGGTCATGGTGCTCGGCGAGTTCGCCACCTCGGCCGCCCTGTCGGGCCGCAAGGTCAACCTGCTCGGCAACATCATCGTCACCCAGGTCGGCTCGCTGAAATGGGCCTTCGCCTCGGTGGCGGGGGTCGTGCTCACGGTCATCATCGGAGCGGTCGTCGCCGGGCTGCTGCGCATCGTCGACCTGCGCAAGGAGCTTTGA
PROTEIN sequence
Length: 312
MKTLAGTVGEDVAVATGGSAAPVRPAAGRRAGSRSAYWLVAPGVAWMALFLVLPIAMILYVSFWTQTTFAIQPILTTRSWVTFFTSGTYLDALWTTIRIWLTVLAATLLVGYPTGLFVGLFVRNKTLQTVLLTLCVIPFWTSFLIRVLAWRPMLGKEGAINIVLQWLGLTNAPIEALLFSDLSVVIGMTQIYCVFMVGPIAFMLGRIDPNIIEAARDLGAGFGRIFRTIILPLSLPGVVVGSIFVSVMVLGEFATSAALSGRKVNLLGNIIVTQVGSLKWAFASVAGVVLTVIIGAVVAGLLRIVDLRKEL*