ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_111575_106

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 111276..112511

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXW0_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 410.0
  • Bit_score: 684
  • Evalue 6.00e-194
ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 410.0
  • Bit_score: 684
  • Evalue 1.70e-194
Putative substrate-binding protein component of ABC transporter {ECO:0000313|EMBL:ENN88476.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 410.0
  • Bit_score: 684
  • Evalue 8.40e-194

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGATGAAGCAGATGGAGATGACGCGGCGTACGCTGCTGAGAGGAAGCAGTGCAGCCATGGCCATGGCGGTGGGCGGCTCCGCGCCGTTCCTGTCCGCCTCGCACGCCCTTGCGGCCGATCCGGCGCTCGCCAAGGAAAGCCTGCGCACGATCGGCCTCTCCGTGACCGTGCAGGAGCGGATCCTGGCGGACTTCAAGGCGACGTCCGGTGTCGGATCGGTCTCCGGCACCGCCGCGACCCATCCGGACGCCCAGACCAAGATCCTGTCGGGCTCTTCCGACTATGATTGCTGGGAGACCAATGCCGAGCGGCTGCCGGCCGTTGTCATGACGCACAATGTCGAAGCCGTTCCGGTCAGCGCCCTGAAGAACTGGGCCAATATCCGCGACACCTTCACCACGCCCAATGCCAAATGGGAGCCGAAGGCGCAGATCACCGGCCAGATCTGGGCGGACGATGCCAGGACCAGCCTCTGGCTCGTCCCGGCCGTCTACAACTACGACTCCGTCGGCTACAATCCGCAGATCGTCTCCGACGAGGAGGCGAACAGCTGGACCGCGCTGTTCGATCCGAAATGGAAAGGCAAGTCCGGCCTCAACACCGACCCGCTGACGGCGCTCGGCCAGGCCTTCATGGCGATGAACTCGCTCGGCCTCTCCCAGGTGAAGAGCCCCGCCAATCCCTCGCCGGCCGAGATCGACGAGGCCATCAAATTCCTGATCTCCAAGAAGAAGGACGGCCAGTTCCGCGCCTTGTGGGGCGATTTCGGCGAGCTCGTCAATCTGCTCGCCTCCGGCGAGATGGTGGTGTGCGACGCCTGGCAGCCGGCGGTGATGGCCGTCAAGGCGCAGGGCAAGGCCTGCAAATATGCCGTGCCGAAGGAGGGCTATCGCGGCTGGGCCATCGGCCCCGCCATGCTGGCCAACACGCCGAACAAGCAAGCCGTCTACGCCTATGCCGACTACTGGCTCTCCGGGCCGCCCGGCATCGCCGTGTCCGAGCAGGGCTATTATTCGCCCTCGACCAACCTGAAGACCCTGATGGCGCCGGAAAAATACGGCTTCTGGTACGAGGGCAAGCCCTGGGTCGGCGCCCCCGAGCGCGGCATCAAGGAGGGCGACCTGCGCGATGGCGGCTCGTTGGAGCAACGGGCCGCGAACGTCGCCTACTGGCACCAGTGGCCGGATGAATATGATCATCTCATCCAGAAGTGGGACGAGTTCCTGAGCGCCTGA
PROTEIN sequence
Length: 412
MMKQMEMTRRTLLRGSSAAMAMAVGGSAPFLSASHALAADPALAKESLRTIGLSVTVQERILADFKATSGVGSVSGTAATHPDAQTKILSGSSDYDCWETNAERLPAVVMTHNVEAVPVSALKNWANIRDTFTTPNAKWEPKAQITGQIWADDARTSLWLVPAVYNYDSVGYNPQIVSDEEANSWTALFDPKWKGKSGLNTDPLTALGQAFMAMNSLGLSQVKSPANPSPAEIDEAIKFLISKKKDGQFRALWGDFGELVNLLASGEMVVCDAWQPAVMAVKAQGKACKYAVPKEGYRGWAIGPAMLANTPNKQAVYAYADYWLSGPPGIAVSEQGYYSPSTNLKTLMAPEKYGFWYEGKPWVGAPERGIKEGDLRDGGSLEQRAANVAYWHQWPDEYDHLIQKWDEFLSA*