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berkeley_reactor_200306_biofilm_scaffold_115287_32

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(29633..30517)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF122 RepID=J2RLN9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 292.0
  • Bit_score: 481
  • Evalue 3.20e-133
Transcriptional regulator {ECO:0000313|EMBL:EJL53782.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 292.0
  • Bit_score: 481
  • Evalue 4.50e-133
ampR; HTH-type transcriptional activator AmpR similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 293.0
  • Bit_score: 479
  • Evalue 5.90e-133

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGTCCGTCCGCATCTGCCGCTGAACGCGCTGCGTGCCTTCGAGGCCTCGGCCCGGCATCTCAGCTTCACCCGGGCGGCGATCGAATTGTGCGTCACGCAGGCCGCGGTCAGCCACCAGGTCAAGAGCCTGGAGCAGCACCTCAACGTCACCCTGTTCGAGCGGCTGCCTCGCGGCCTGATGTTGACGCAGGAAGGGGAGGTGCTGCTGCCCGCCTTGCGCGACTCCTTCGACCGCATCGCCGGCACGCTGGAGCGCTTCGAGGGCGGGCGCTATCGCGAGGTGCTCCGGGTTGGGGCGGTCGGCACCTTCGCGGTCGGCTGGCTGCTGCCGCGCCTCGGCGACTTCCAGGCCCGGCATCCCTTCATCGACCTGCGCCTGTCGACCAACAACAACCGCGTCGACATCGCCGCCGAGGGCCTCGACTATGCCGTCCGCTTCGGCACGGGCGCCTGGCACGGGGTCGAGGCCGTCCGGCTCCTGGACGCGCCGTTGTCGCCCCTGTGCCTGCCCGACATCGCCGCGCGGCTCGCGGCCCCGGCCGACCTCCTCGGGCACACGCTGCTGCGCTCCTACCGGGCGGACGAATGGCCGCGCTGGTTCGCGGCCGCCGGCGTGCCGTCTGGCGTGAGTCCGCCGAAGAGCATCGTGTTCGATTCCTCCCTCGCCATGATGGAGGCGGCGCTGCAGGGGGCCGGCATCGCCCTGGCGCCGCCCTCGATGTTCGCCCGGCACCTGCAGGCGGAGGCGATCCGGCAGCCCTTCGACATGGTCGTCACGCTCGGCAGCTATTGGCTGACGCGCCTGCAGTCACGCCCGGTCACCCCGGCCATGGCCGCCTTCCGCGACTGGCAGGTCGCGGCCGCCGGAGCAGGGGACCGGTAG
PROTEIN sequence
Length: 295
MVRPHLPLNALRAFEASARHLSFTRAAIELCVTQAAVSHQVKSLEQHLNVTLFERLPRGLMLTQEGEVLLPALRDSFDRIAGTLERFEGGRYREVLRVGAVGTFAVGWLLPRLGDFQARHPFIDLRLSTNNNRVDIAAEGLDYAVRFGTGAWHGVEAVRLLDAPLSPLCLPDIAARLAAPADLLGHTLLRSYRADEWPRWFAAAGVPSGVSPPKSIVFDSSLAMMEAALQGAGIALAPPSMFARHLQAEAIRQPFDMVVTLGSYWLTRLQSRPVTPAMAAFRDWQVAAAGAGDR*