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berkeley_reactor_200306_biofilm_scaffold_115287_33

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 30728..31918

Top 3 Functional Annotations

Value Algorithm Source
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 382.0
  • Bit_score: 524
  • Evalue 8.20e-146
Beta-lactamase class C and other penicillin binding protein (EC:3.5.2.6) similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 394.0
  • Bit_score: 522
  • Evalue 8.20e-146
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rhizobium sp. AP16 RepID=J2DCS5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 382.0
  • Bit_score: 524
  • Evalue 5.90e-146

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1191
ATGACTGCCGTGATCAAGAGATCCATCCTCCGAATCGGGATTGCTGCTGCGGTTTCTCTCGTCTGCAGCGCCGGCGTCCTCGCAGCTGACGGGCAAGATCCCGCGCAGCTCGGGCCGATCGTCGATCAGGTGATCCGCCCTCTCATGGCGGCGAACAAGATCCCGGGCATGGCCGTCGCCGTCACGCTCGGCGGGCGGCACGCCGTCTTCACCTACGGCCTCGCCTCCCGCGAGAGCGGCGAGAAGGTCCGTGACGACACGCTGTTCGAGATCGGCTCGGTCAGCAAGACCTTCACCGCCGCCCTCGGCGGCCTGGCGCAGGCGCGCGGCGCCCTGTCGCTCGCCGACACCGCGAGCCGATACCTGCCGGCCCTCGCCGGCAGCAGCTTCGACCGCATCAGCCTGCTCGACCTCGCCACCTACACCGCGGGCGGCCTGCCCCTGCAGTTTCCCGACGCGGTGCGCGGCGAGGATGGGATCATCGCCTATTTCAAGGCCTGGCGCCCGGCCTACCCCGCCGGCACGCAGCGGCTCTACTCGAACCCGAGCATCGGCCTGTTCGGCGATCTGGCGGCCCGGAGCATGGGCGGGAGCTTCGAGGACCTGATGGAAAAGCAGCTCTTCCCGGCGCTGGGCCTCGCCTCCACCTTCATCCGGGTTCCCCAGGATCAGATGGGCCGCTATGCCTTCGGCTACACCGGGGCCGGCAAGCCGGTCCGGGTGGGCCCGGGCGCCCTCGCCTCGCAGGCCTATGGCGTGAAGACCACGGCCGGCGATCTCATCCGCTTCGTGGAAGCCAACATGGACGGCACCGGGCTGGACGACACGCTGCGGCGCGGGCTCGCGGCAACCCACACCGGATATTTCAAGGTCGGCCCCATGACCCAGGGCCTGGGCTGGGAGATGTATGCCTATCCCACCACCCTGGACCGCCTGCTCGCCGGCAACTCCGCCGAGATGGCTCGCCAGCCGCACGCAGTGGCGAAGCTCGATCCGCCGGCCGCGCCGCGGACCGACATGCTAATCAACAAGACCGGCTCGACCAACGGCTTCGGCACCTATGTCGCCTTCGTGCCGGAACGGCGCCTCGGCATCGTCCTGCTGGCCAACCGGAACTATCCGATTCCCGCCCGGGTCGAGGCCGCCTACCGGATCCTGACCGCGCTGGACAAAGAGGCCAAGGCCGACTGA
PROTEIN sequence
Length: 397
MTAVIKRSILRIGIAAAVSLVCSAGVLAADGQDPAQLGPIVDQVIRPLMAANKIPGMAVAVTLGGRHAVFTYGLASRESGEKVRDDTLFEIGSVSKTFTAALGGLAQARGALSLADTASRYLPALAGSSFDRISLLDLATYTAGGLPLQFPDAVRGEDGIIAYFKAWRPAYPAGTQRLYSNPSIGLFGDLAARSMGGSFEDLMEKQLFPALGLASTFIRVPQDQMGRYAFGYTGAGKPVRVGPGALASQAYGVKTTAGDLIRFVEANMDGTGLDDTLRRGLAATHTGYFKVGPMTQGLGWEMYAYPTTLDRLLAGNSAEMARQPHAVAKLDPPAAPRTDMLINKTGSTNGFGTYVAFVPERRLGIVLLANRNYPIPARVEAAYRILTALDKEAKAD*