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berkeley_reactor_200306_biofilm_scaffold_106678_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(3186..3827)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003750078 similarity UNIREF
DB: UNIREF100
  • Identity: 44.5
  • Coverage: 209.0
  • Bit_score: 172
  • Evalue 2.30e-40
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:EHK60729.1}; TaxID=1118153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. GFAJ-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 196.0
  • Bit_score: 145
  • Evalue 5.60e-32
chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 195.0
  • Bit_score: 131
  • Evalue 2.20e-28

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Taxonomy

Halomonas sp. GFAJ-1 → Halomonas → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGGTGGCCGAAGTCGACCATACGCAGAGCCTCGTCGGCAGCATCGCCGACAAGATCGACGGCTTCTTCTACCGCTGCCTCAACGACAAGGACTTCACCATGCTGCACCTGTCGTCGGGCTTCACCCCGACGCTGGGCTATGACGCGGACTGGTTCATCTCGACCCGGCAGTCCTTCACCGCCATCACCCATCCCGACGACCAGGCGAAGGTCGACAAGGCGGTGACCGAGGCGCTTGCCACGGGGCAGCGCTGGCGCATCCATTACCGGCTGAAGGCCAGGAGCGGAGAATGGCGGCCGATCTTCGAGACCGGCGGCGCCTACCACGATCCCGCCACCGGCGAGACCGCCTATCTCGACGGCGTCATCCTCGACGTGAAGAGCCAGGCCGATATCGGCGGCCGGGCCCAGGCGGCGCGCGAGATCGCCAGCGCCACCGGCGAGATCATGAAGACGCTGAAGACGCTGCGCCTGCTCGCGCTCAACGCCCGGCTGGAGGCGGTGCGCGCCGGCGAGCACGGGCTCGGCTTCACCGTGGTCGCCCGCGAGATGGTCGACCTCGCCGCCCAGAGCGACGTCAACGCCCGCGTCATCGAACGCCTGATCAGCAAGCTCGACGACGACGGGGCGATGGCGGCCTGA
PROTEIN sequence
Length: 214
MVAEVDHTQSLVGSIADKIDGFFYRCLNDKDFTMLHLSSGFTPTLGYDADWFISTRQSFTAITHPDDQAKVDKAVTEALATGQRWRIHYRLKARSGEWRPIFETGGAYHDPATGETAYLDGVILDVKSQADIGGRAQAAREIASATGEIMKTLKTLRLLALNARLEAVRAGEHGLGFTVVAREMVDLAAQSDVNARVIERLISKLDDDGAMAA*