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berkeley_reactor_200306_biofilm_scaffold_106678_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(22733..23944)

Top 3 Functional Annotations

Value Algorithm Source
arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase (EC:2.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 387.0
  • Bit_score: 402
  • Evalue 7.40e-110
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase {ECO:0000313|EMBL:CBK40650.1}; EC=2.6.1.- {ECO:0000313|EMBL:CBK40650.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 387.0
  • Bit_score: 402
  • Evalue 3.70e-109
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBP1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 387.0
  • Bit_score: 402
  • Evalue 2.60e-109

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Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1212
ATGCTGAGGAGCGAAGATCGGCGAAGCGGCCCGTCGAGCCCGACCGGCAATGCTGCGCCGCGAACCATCCCCTATTTCCGACCCAGCATCGGCGACGCGGAAGTCGAAGCGGTGCGCCAGACGCTGTCGTCGGGCTGGCTGACCACCGGGCCGAGGGTCCAGGAGTTCGAGCTCGCCTTCGCCCGATATGTCGAGGTCGATCATGCCGTCGCGGTGAGCTCGGCCACGGCGGCGCTGCACCTGGCCCTCGAGGCATTGGGCGTGGGGCCCGGCGACGAGGTCCTCGTGCCCACCATGACCTTCGCTTCGGTGGCGGCCGTGGTGATTCATCTGGGCGCCCGGCCGGTATTCGTCGACTGCCTGCCCGATTCCCTCGACATCGATCCCGCCGATCTGGAACGGCGGCTGACGCCCCGCGCGAAGGTCGTCGTTCCCATGCACCACGGCGGGCATCCCTGCCGGATGGATCGGATCCTCGAACTGGCGCGTCGGCATCGCCTTGCGGTGGTCGACGACGCGGCCCACGCCCTGCCGGCGCAATATGGCGGGCGAAACATCGGGACGATCGGGGACGCCACCTGCTTCTCGTTCTATGCCAACAAGACGGTCACGACCGGAGAAGGCGGGATGGTCGCGACCCGGGATCCCGACCTCGCCAAGCGGGTGCGCCTCATGGCGCACAACGGGATCGACCGAAGCGGCACGACCCAGACGGGCGTTCGCCGCAGCTGGCGGTACGACATAAAGGCTCCGGGCTACAAGGCGAACATGACGGATCTCGCGGCCTCGATCGGCATCCGCCAGCTGGAGAGGTGCGATGCGTTCCGGGATGCCCGGGCGCGATGGGCCGATGCCTATACGGAAGGTCTGCGGGACCTCGAGGCGATCAGGACGCCGAGGCCCGGCGCCGACGTGCGCTCGTCCTGGCATCTCTACGTGATTCAACTGGAGCTCGATCAGCTGCGAGTCGGGCGCGACGCCTTCATCGATCTCCTCGAGGCGAAGGGCGTCGGCAGCAGCGTCCATTTCATGCCGCTGCACCTGCATTCATACTACCGGGATACGTTCGGCTGTCAGCCGGAGGACCTGCCCAACGCGGCGAGGGCCTATGAGCGCATCCTGTCCTTGCCGATCTTCCCGGGCCTGAGCCGTGAGGATGTCGGGTATGTCGTGGAGACGATCGCGTCGATCGTCCGCGACCATCGCCGATGA
PROTEIN sequence
Length: 404
MLRSEDRRSGPSSPTGNAAPRTIPYFRPSIGDAEVEAVRQTLSSGWLTTGPRVQEFELAFARYVEVDHAVAVSSATAALHLALEALGVGPGDEVLVPTMTFASVAAVVIHLGARPVFVDCLPDSLDIDPADLERRLTPRAKVVVPMHHGGHPCRMDRILELARRHRLAVVDDAAHALPAQYGGRNIGTIGDATCFSFYANKTVTTGEGGMVATRDPDLAKRVRLMAHNGIDRSGTTQTGVRRSWRYDIKAPGYKANMTDLAASIGIRQLERCDAFRDARARWADAYTEGLRDLEAIRTPRPGADVRSSWHLYVIQLELDQLRVGRDAFIDLLEAKGVGSSVHFMPLHLHSYYRDTFGCQPEDLPNAARAYERILSLPIFPGLSREDVGYVVETIASIVRDHRR*