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berkeley_reactor_200306_biofilm_scaffold_106678_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 27582..28919

Top 3 Functional Annotations

Value Algorithm Source
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 437.0
  • Bit_score: 633
  • Evalue 1.80e-178
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Xanthobacteraceae RepID=UPI00037A7B3F similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 442.0
  • Bit_score: 644
  • Evalue 5.70e-182
3-phosphoshikimate 1-carboxyvinyltransferase similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 437.0
  • Bit_score: 633
  • Evalue 3.70e-179

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
GTGACCGCCGCCGACACCCCCGTCCCGCTCACCGCCCGGCGCTCGCCGGGCCTCAAGGGGCGCGTGCGCGTGCCCGGCGACAAGTCGATCTCGCACCGCTCGCTGATCTTCGGCCTCCTGACCGTCGGCGAGACGGCGATCTCCGGCCTCCTCGAAGGGGCGGACGTGCTGGCGACGGCCGAGGCCTGCCGCAAGCTCGGGGCCAGCGTGACGCGCACCGGCGAAGGCGCCTGGCGCGTCAACGGCGTCGGCGTCGGCGGGCTCGCCGCCCCGGCCTCCGCACTCGACTTCGGCAATGCCGGCACCGGCTCGCGGCTGATGATGGGCGTGGTCGCCGGCCACGGCGTCACCGCCACCTTCGACGGCGACGCTTCGCTGCGCAAGCGACCGATGATGCGAGTGCTCGCGCCGCTCCTGAGCATGGGCGCCGAGATCGTGTCGAGCGCCGAGGGCGGCCGGCTGCCGCTGGTGCTGAAGGGATCGGCCGACCCGGTGCCGATCACCTACGAGACGCCGGTGCCGTCGGCGCAGGTCAAGTCGGCCGTGCTGCTGGCCGGCCTCAATGCGCCCGGCCGCACCACCGTGATCGAGGCCGAGGCGACGCGCGACCACACCGAGCGGATGCTGACCCATTTCGGCGCCTCCGTGAGCGTCGCGCCGCACGGCGCGCACGGCGCCCGCATCGTGCTGGACGGGCGGCCCGACCTGCGGCCCAACCCGGTCGCTGTGCCGGCGGACCCGTCCTCCGCCGCCTTCCCGCTGGTGGCGGCGCTGATCACGCCCGGCTCCGACATCGTGATCGAGGGCGTGATGATGAACCCCTCGCGCACCGGGCTGATCGCCACCCTCCGGGAGATGGGCGGCGACATCGTCGAGCTCGACCGGCGCATCGAGGGTGGCGAGGACGTCGCCGACCTGAGGGTCCGCCACTCCGCCCTCGTCGGCGTCGAGGTGCCGGCGGCGCGGGCGCCGTCGATGATCGACGAATTTCCGGTGCTGGCGGTCGCGGCCGCCTTCGCGCGCGGGACGACGCGGATGAACGGCCTCAAGGAGTTGCGGGTCAAGGAAAGCGACCGGCTCGCCGCCGTCGCCGACGGGCTCAGGGCGAACGGGGTCGAGCACGAGGTCGAGGGCGACGACCTCCTCGTTTCGGGCCTCGGCCGGGCGCCCGGCGGCGGCGTGGTCACGACCCATATGGACCATCGCATCGCCATGGCCTTCCTGGTGATGGGCCTCGCCGCCGACGCCCCGGTCGGCGTCGACGACACCGGCTTCATCGCCACCAGCTTCCCCAGCTTCGTGCCCGTCATGACCGGGCTCGGAGCTTTGTTCGACTGA
PROTEIN sequence
Length: 446
VTAADTPVPLTARRSPGLKGRVRVPGDKSISHRSLIFGLLTVGETAISGLLEGADVLATAEACRKLGASVTRTGEGAWRVNGVGVGGLAAPASALDFGNAGTGSRLMMGVVAGHGVTATFDGDASLRKRPMMRVLAPLLSMGAEIVSSAEGGRLPLVLKGSADPVPITYETPVPSAQVKSAVLLAGLNAPGRTTVIEAEATRDHTERMLTHFGASVSVAPHGAHGARIVLDGRPDLRPNPVAVPADPSSAAFPLVAALITPGSDIVIEGVMMNPSRTGLIATLREMGGDIVELDRRIEGGEDVADLRVRHSALVGVEVPAARAPSMIDEFPVLAVAAAFARGTTRMNGLKELRVKESDRLAAVADGLRANGVEHEVEGDDLLVSGLGRAPGGGVVTTHMDHRIAMAFLVMGLAADAPVGVDDTGFIATSFPSFVPVMTGLGALFD*