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berkeley_reactor_200306_biofilm_scaffold_93794_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(580..1671)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF38DF related cluster n=1 Tax=unknown RepID=UPI0003CF38DF similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 367.0
  • Bit_score: 628
  • Evalue 2.60e-177
Transposase {ECO:0000313|EMBL:ESW77789.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 367.0
  • Bit_score: 628
  • Evalue 3.70e-177
transposase IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 360.0
  • Bit_score: 609
  • Evalue 6.10e-172

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
GTGCGTGGCGGCGACGAGCGATCCGGTGAGCTGTTCAGCTACGTGGATCTGGAGGCGCGGGTGCGTCGGGATCATCCGCTGCGGGTGATCCGGGTGATTGTGAACGAAACGCTGTCCGCGCTCGGATCGGAGTTCGCGGCGCTGTATTCTGGGATGGGCAGGCCGTCGATACCGCCGGAGAAGCTGCTCCGGGCGATGCTGCTGCAGGCCTTCCACTCGATCCGCTCGGAGCGGCAGCTGATGGAACGGCTGGAGTACGACTTGTTGTTCCGCTGGTTCGTGGGGATCGGGGTCGACGAGGCGGCGTGGGACCATTCGACCTTCTCGAAGAACCGTGACCGGCTGCTGGCGGGCGAGATTGCGGCGAAGTTCCTGTCTGCGGTGCTGGCTCAACGCCAAGTGAAGCAACTTCTGTCGACGGACCACTTCTCGGTCGACGGCACGCTGATCCAGGCCTGGGCTTCGATGAAGAGCATCAAGCCAAAGGAGGGTTCGAGCGAGCCGCCGAAGGACGGGGGTGGACGCAACGCGGACGCGGACTTTCATGGTCAAAGGCGGACCAACGAGACACATGCCTCGACCACCGATCCGGATGCTCGACTCTACCGCAAGGGCGCGGGCAAGGAGGCGAGGCTGTGCTTCATGGGCCATGGCCTGATGGAGAACCGCCACGGCCTCATCGTCGATGCCTGTCTGACGCAGGCGGATGGGCAGGCTGAGCGGGTGGCGGCTCTGCACATGATCGAGCCATGGGCCGACCGGTCGAACGCGATCACGCTGGGGGCCGACAAGGCCTATGACGCACAGGACTTCGTCAATGAGTTGCGCTCGATGAAGGTCACGCCGCATGTGGCGCAGAATGCGAATGGCCGCCGGTCCGCCATCGACGGGCGCACGACGCGGCATACGGGCTACGCCGTCAGCCAGCGCATCCGCAAACGCATCGAGGAGGCCTTCGGCTGGATCAAGACCGTTGCCGGCCAGGCCAAGACCCGGTTCCGGGGGCGCGAGCGCGTCGGATGGGCTTTCGTGTTCGCAGCCGCCGCCTACAACCTGGCGCGGCTGCCCAAGCTCGTGGTGGCTCCGACATGA
PROTEIN sequence
Length: 364
VRGGDERSGELFSYVDLEARVRRDHPLRVIRVIVNETLSALGSEFAALYSGMGRPSIPPEKLLRAMLLQAFHSIRSERQLMERLEYDLLFRWFVGIGVDEAAWDHSTFSKNRDRLLAGEIAAKFLSAVLAQRQVKQLLSTDHFSVDGTLIQAWASMKSIKPKEGSSEPPKDGGGRNADADFHGQRRTNETHASTTDPDARLYRKGAGKEARLCFMGHGLMENRHGLIVDACLTQADGQAERVAALHMIEPWADRSNAITLGADKAYDAQDFVNELRSMKVTPHVAQNANGRRSAIDGRTTRHTGYAVSQRIRKRIEEAFGWIKTVAGQAKTRFRGRERVGWAFVFAAAAYNLARLPKLVVAPT*