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berkeley_reactor_200306_biofilm_scaffold_93794_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 2036..2704

Top 3 Functional Annotations

Value Algorithm Source
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1094563 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella washoensis Sb944nv.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 208.0
  • Bit_score: 191
  • Evalue 7.10e-46
muraminidase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D9C9E8 similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 212.0
  • Bit_score: 198
  • Evalue 5.40e-48
phage related lysozyme similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 209.0
  • Bit_score: 191
  • Evalue 1.40e-46

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Taxonomy

Bartonella washoensis → Bartonella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCCCCGCCACGTCATCGATGCCGTCCGCGCCAAGCTCGAGCAGTTCGAGGGGCTGCGGCTCACCGCCTATCGCGACGCAGTCGGCGTCCTGACGATCGGCTATGGCCACACCGGGCCCGACGTCCGGCCGGGTCTCACCATCGACCGCGCGCGGGCCGACCAGTTGCTGGCGCAGGACCTCGCCGAGGCCGAGAGCGCTGTGTCGCGCCTGGTCAAGGTGCCCCTCTCCGACAATCAGTTCGGTGCCCTCGTCTCCTTCGCCTTCAACGTCGGCACCAGCGGTTTCGCCGGCTCAACGCTGCTCAAGAAGCTGAACGCCGGAAACTATGACGCCGTGCCTGGCGAACTTGCGAAGTGGAACAAGGGCACGGTCAACGGCAAGAAGGTCGCGATCCCCGGCCTGACGAACCGCCGCGCAGCCGAGGCTGGCATCTGGGCGGCCGGAGCGCATGTCTCGTCCAACTACGTCCCTGCCACGCCAACCCCGGCGGGCAGCTGGCTTGCCAAGCCGGAGACGATCGCCGGCGGTGTCTCGGTCGCCACGGCGGTTGCCGGCGCCGCAAACAATGGCGGGCCGATCGCCTGGGCGGTCGCGGCCGTCATCACCGGCACCCTGATCGTCGCCGCGATCCACTTCATCCGGCGCCTGCGGGAGAGCGCGTCGTGA
PROTEIN sequence
Length: 223
MPRHVIDAVRAKLEQFEGLRLTAYRDAVGVLTIGYGHTGPDVRPGLTIDRARADQLLAQDLAEAESAVSRLVKVPLSDNQFGALVSFAFNVGTSGFAGSTLLKKLNAGNYDAVPGELAKWNKGTVNGKKVAIPGLTNRRAAEAGIWAAGAHVSSNYVPATPTPAGSWLAKPETIAGGVSVATAVAGAANNGGPIAWAVAAVITGTLIVAAIHFIRRLRESAS*