ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_101524_31

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 31520..33034

Top 3 Functional Annotations

Value Algorithm Source
Small-conductance mechanosensitive channel n=1 Tax=Rhizobium sp. CF122 RepID=J3BIH4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 508.0
  • Bit_score: 679
  • Evalue 1.80e-192
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:EJL51429.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 508.0
  • Bit_score: 679
  • Evalue 2.50e-192
cyclic nucleotide-regulated small mechanosensitive ion channel similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 496.0
  • Bit_score: 610
  • Evalue 3.80e-172

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1515
ATGTTGAGCTACGACGACGTTCGCGCCATGCTCATCGACCCGATGGTCCAGACCGGCGCCCTCGCCGTGATCGGCGCGGTGATCACGCGCGTTCTGCTGCGCAAGCATCCGACCCGCCGCCTGGTGGGACAATTGCTGTTCTTCTCCGCCCTCACCGCGCTGCTGCTCTACCACGGCATCGTGCCCTACGAGCCGGGGCCGCCGGGAGCCTCTAGCCTCCAGCGCGTCTTCATCGGCATCGCCAAGATCATCTGGTGGACGAACGCGGCCTGGTCGCTGATCAGCGTCGTCCGCGTCTTCCTGATCTTCGAGCGCCAGCCCCGCGAAGGCCGGCTGATCCAGGATCTCGTCGTCGGCGTCATCTATGTCGGCGCGCTGCTCTCGGTGATCGCCTATGTCTTCAACGCGCCGGTCGGGACGCTGATCGCCACGTCGGGCGTCTTCGCCATCATCCTCGGCCTCGCCCTGCAGAGCACGCTCGGCGACGTGTTCTCCGGCATCGCCCTCAACCTCAGCCGGCCCTATGCCATCGGCGACTGGCTCGTGCTCGCCAACGGCATCGAGGGCCGGGTCGTGGAGACGAACTGGCGGGCGACCCACCTCCTCAACGGGGCCAACGATCTCGTCATCGTGCCCAACAGCGATCTCGCCAAGGCCAGGCTCACCAATCTCAGCAGCCCGGAGCGCAGCCACGGCGCGACGGTCACGGTGCGGTTCCGGCCGACGACGACGCCGTCCGTGATGGTGGACGTCTTGCGTTCGGTCTTCCTGAGCAGCGACTGCGTCCTGCCGACGCCGGCCCCGACCATCCAGGTGACGTCGCTCGATGCCAGCGCGGTCGAGCTGGAGCTCTCCTTCCGCGTCGTGGACATGTCGGCGACCGGGCGGGCGAAGAACGAGATCTTCGATCTCGTCTACCGCCATGCCAGGGCGGCGGGACTGGTTCTTTCACCCTCGGTCGCGGGCGACGGCGCCCCGTCGGCGCCGGCGAAGGCGGATGATGTGTCGGCCCCTCGCCGGAGCACGCCGCTGCGCCTGCTCGACGCCATGCCCCTGTTCGCCGCCCTGACCGACGAGGAGAAGGAAGCCCTCGCCGCGACGATGATCCGGCGCACCTTCCGCAAGGGCGAAACGCTGGTCGAGCAAGGCGCGGTGCTCAAATCGCTGATGATCATCCGCAGCGGCGCCGCGGTGGTGACGCAGCGGGACAAGGGGCAGGAGCAGGAGCTCGAACACCTCGCACCCGGTCATTTCTTCGGCGAGGGCGGCCTGCTGACCGGTGCCGGCGAGCCCGGGGCCATCCGGGCCCTGACCTTCGTGGTGGTCTACGAAGTGACGCAGGACGGCCTGGCGCCGCTGATGCGCGATCGCCCCACCCTGGCCGAGGAGATCGGGGCCGCCCTGTCCCGCCGCAGCGCTTCGGACCTGCGCCTGGCCAAGGCGAGCGCGAAGGCCACCCAGGTCGAAACGGCCAGGGGCCTGGCGGCGCGCATCCGGGATCTGTTCGACCTCTGA
PROTEIN sequence
Length: 505
MLSYDDVRAMLIDPMVQTGALAVIGAVITRVLLRKHPTRRLVGQLLFFSALTALLLYHGIVPYEPGPPGASSLQRVFIGIAKIIWWTNAAWSLISVVRVFLIFERQPREGRLIQDLVVGVIYVGALLSVIAYVFNAPVGTLIATSGVFAIILGLALQSTLGDVFSGIALNLSRPYAIGDWLVLANGIEGRVVETNWRATHLLNGANDLVIVPNSDLAKARLTNLSSPERSHGATVTVRFRPTTTPSVMVDVLRSVFLSSDCVLPTPAPTIQVTSLDASAVELELSFRVVDMSATGRAKNEIFDLVYRHARAAGLVLSPSVAGDGAPSAPAKADDVSAPRRSTPLRLLDAMPLFAALTDEEKEALAATMIRRTFRKGETLVEQGAVLKSLMIIRSGAAVVTQRDKGQEQELEHLAPGHFFGEGGLLTGAGEPGAIRALTFVVVYEVTQDGLAPLMRDRPTLAEEIGAALSRRSASDLRLAKASAKATQVETARGLAARIRDLFDL*