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berkeley_reactor_200306_biofilm_scaffold_103592_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 3224..3616

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 127.0
  • Bit_score: 178
  • Evalue 3.60e-42
UPI0003CE3177 related cluster n=1 Tax=unknown RepID=UPI0003CE3177 similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 127.0
  • Bit_score: 180
  • Evalue 6.80e-43
PIN domain protein similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 127.0
  • Bit_score: 177
  • Evalue 2.10e-42

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Taxonomy

Mesorhizobium sp. L2C066B000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGATCGCGGTCGACACGTCGGCACTGATGGCGATCCTCCTGAACGAGTCGCAGGCCGACGCATGCATCGCGGCGCTGGCCGTCGACGGATCCATCCTGATCTCGGCCGGAACCGTCGCCGAGGCGATGATCGTCGCGCGGCGGCGCGGCGTCGGCGAGGAGATGGCGGGGCTGATCGAGCGCCTCGGTCTCAAGGTCGTGCCGGTGACCGCGGCGACGGCACGCGCGGTCGCCGATGCCTATGGCCGGTGGGGGAAGGGCGTCCATCCGGCGGGCCTCAATTTCGGCGACTGCTTCGCCTATGCGATTGCGGCGGACCATGGCTGCCCGCTGATCTTCGTCGGTGAGGATTTCGCGAGGACGGACGTGCCGGCGGCCCTGCAGGGGCGATAG
PROTEIN sequence
Length: 131
MIAVDTSALMAILLNESQADACIAALAVDGSILISAGTVAEAMIVARRRGVGEEMAGLIERLGLKVVPVTAATARAVADAYGRWGKGVHPAGLNFGDCFAYAIAADHGCPLIFVGEDFARTDVPAALQGR*