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berkeley_reactor_200306_biofilm_scaffold_103592_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(15711..16367)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF122 RepID=J3BE72_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 205.0
  • Bit_score: 330
  • Evalue 8.90e-88
Transcriptional regulator {ECO:0000313|EMBL:EJL49671.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 205.0
  • Bit_score: 330
  • Evalue 1.30e-87
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 205.0
  • Bit_score: 322
  • Evalue 9.00e-86

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGAACAGACTCAGAAATTGGGGGGAAGCCATGGCCGGGCTGCGCGCGAGGCAGAAGGCGGATCGCAGCCGGCGCATCCTGGAGGCGGCGACCAGCCTGTTCCGCGAGGCCGGCTACGAGGCGGCCCGCATCGAGGACATCGCCGAGCGCGCCGAGGTCTCGGTCGGGACCTTCTACAATTATTACGAGAACAAGGGCGACATCCTGGTCGCCGTCGTCAGCATGGAGGTGGAGGAGGTGCTGGAGGCCGGCCGTGCCATCGTCGAGGCGCCGCCCCCCTCGGTCGCCGAGGCGCTGAAGACGCTGATCGAGCAATATTACGACCACTCGCTGGTCTATCTCAGCAAGGCGATGTGGCGGGCGGCCATGGCCATGTCGATCCAGCAGCCGGAGAGCCCGTTCAGCCGGCGCTACACCGACCTCGACCAGCGCCTGTGCGAGCAGGTGTCGAGCCTGATCCGCAAGCTGCAGCTGCGCGGAGCGGTGATGCCGGGCATCGACGCCGAGGCGGTCGGGCAGATGCTGTTCAACAACCTCAACGCGATGTTCACGGAGTTCGTCAAGCAGGAGGCCATGACGCTGGACGGCCTCAAGGAGCAGGTCGGGCGGCAGAACCGGCCGCTCGCCAGCCTGATCGCCGCGCCTGCGCCGGCGTGA
PROTEIN sequence
Length: 219
MNRLRNWGEAMAGLRARQKADRSRRILEAATSLFREAGYEAARIEDIAERAEVSVGTFYNYYENKGDILVAVVSMEVEEVLEAGRAIVEAPPPSVAEALKTLIEQYYDHSLVYLSKAMWRAAMAMSIQQPESPFSRRYTDLDQRLCEQVSSLIRKLQLRGAVMPGIDAEAVGQMLFNNLNAMFTEFVKQEAMTLDGLKEQVGRQNRPLASLIAAPAPA*